RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 TIMM13Q9Y5L4 95 aaPredicted RBP17.84■□□□□ 0.45
CSGALNACT1-216ENST00000524213 PI4K2BG5E9Z4 385 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 GNA14O95837 355 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 FAM163BP0C2L3 166 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DLG4P78352 724 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZACNQ401N2 412 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CT47A1Q5JQC4 288 aaPredicted RBP17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ATAT1Q5SQI0 421 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CYP26C1Q6V0L0 522 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TOP6BLQ8N6T0 577 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 KREMEN2Q8NCW0 462 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CMASQ8NFW8 434 aaPredicted RBP17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZNF461Q8TAF7 563 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 FAM84AQ96KN4 292 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DUSP9Q99956 384 aaKnown RBP17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 FBXW11Q9UKB1 542 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MAFFQ9ULX9 164 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SNX9Q9Y5X1 595 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TRIOO75962 3097 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MYO10Q9HD67 2058 aa17.83■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC195A0A1B0GUA6 201 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ELF1P32519 619 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 STX17P56962 302 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ROR1Q01973 937 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC40Q4G0X9 1142 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 LIN9Q5TKA1 542 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TDRD10Q5VZ19 366 aaKnown RBP17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TPGS2Q68CL5 300 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 RBM43Q6ZSC3 357 aaKnown RBP17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC149Q6ZUS6 474 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SV2AQ7L0J3 742 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 FRMD5Q7Z6J6 570 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 VRTNQ9H8Y1 702 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TMEM8AQ9HCN3 771 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZDHHC7Q9NXF8 308 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ARMCX3Q9UH62 379 aaPredicted RBP17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MUTYHQ9UIF7 546 aa17.82■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CPB1P15086 417 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 LHX1P48742 406 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ARPP19P56211 112 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MYL6P60660 151 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TNNC1P63316 161 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 NCOA4Q13772 614 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SGSM1Q2NKQ1 1148 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 C1orf220Q5T0J3 134 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TCERG1LQ5VWI1 586 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 WSCD1Q658N2 575 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 KRT39Q6A163 491 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 C15orf39Q6ZRI6 1047 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TAF4BQ92750 862 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZNF707Q96C28 371 aaPredicted RBP17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 EEF2KMTQ96G04 330 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 AFF4Q9UHB7 1163 aaKnown RBP17.81■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DOCK8Q8NF50 2099 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 WDR27A2RRH5 827 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 C2CD4DB7Z1M9 353 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DCXO43602 365 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZMYND10O75800 440 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ABLIM3O94929 683 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CLSTN1O94985 981 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TRIM49P0CI25 452 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TRIM49CP0CI26 452 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 P4HA1P13674 534 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ATF2P15336 505 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 HOXA9P31269 272 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 PIK3CAP42336 1068 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MYL7Q01449 175 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SMARCB1Q12824 385 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 TPD52L1Q16890 204 aaPredicted RBP17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZNF699Q32M78 642 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ZNF667Q5HYK9 610 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ADGRF2Q8IZF7 708 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 PDCL2Q8N4E4 241 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC150Q8NCX0 1101 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SMG7Q92540 1137 aaKnown RBP17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MMS19Q96T76 1030 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 SRRTQ9BXP5 876 aaKnown RBP17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 RHOBTB2Q9BYZ6 727 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 NR2E1Q9Y466 385 aa17.8■□□□□ 0.44
CSGALNACT1-216ENST00000524213 PAPLNO95428 1278 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 VNN1O95497 513 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 C8AP07357 584 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 CCDC192P0DO97 292 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 ALADP13716 330 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 GCLMP48507 274 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 MXI1P50539 228 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 PPP3CAQ08209 521 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 GPR17Q13304 367 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DCAF17Q5H9S7 520 aaPredicted RBP17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 PPM1LQ5SGD2 360 aa17.79■□□□□ 0.44
CSGALNACT1-216ENST00000524213 DCP1BQ8IZD4 617 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms