RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 OR4Q2P0C623 313 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 OR52Z1P0C646 297 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 DDX6P26196 483 aaKnown RBP eCLIP10.28□□□□□ -0.76
VIRMA-208ENST00000523263 MCM7P33993 719 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 PXNP49023 591 aaPredicted RBP10.28□□□□□ -0.76
VIRMA-208ENST00000523263 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.762e-8■■■■□ 23.7
VIRMA-208ENST00000523263 MCL1Q07820 350 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 ZNF252P-AS1Q0IIN9 211 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 SMARCB1Q12824 385 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 ECM1Q16610 540 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 KYAT1Q16773 422 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 OVOS1Q6IE37 1185 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 ARMCX5Q6P1M9 558 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 LRSAM1Q6UWE0 723 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 ZPBP2Q6X784 338 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 ATAD1Q8NBU5 361 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 C2orf15Q8WU43 125 aaKnown RBP10.28□□□□□ -0.76
VIRMA-208ENST00000523263 SPIRE2Q8WWL2 714 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 DRC1Q96MC2 740 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 SLC46A2Q9BY10 475 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 SMOC1Q9H4F8 434 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 POLD4Q9HCU8 107 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 TBX20Q9UMR3 447 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 FAM208BQ5VWN6 2430 aa10.28□□□□□ -0.76
VIRMA-208ENST00000523263 GREB1Q4ZG55 1949 aa10.27□□□□□ -0.76
VIRMA-208ENST00000523263 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 SRRM3A6NNA2 597 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 GIPC1O14908 333 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 CLDN3O15551 220 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 RNF40O75150 1001 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 LARGE1O95461 756 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 APBB3O95704 486 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 CYP11A1P05108 521 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 CLTAP09496 248 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 CCT6AP40227 531 aaKnown RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 GALK1P51570 392 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 MAPK7Q13164 816 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 TRIM29Q14134 588 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 ZNF268Q14587 947 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 NOLC1Q14978 699 aaKnown RBP eCLIP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 VEPH1Q14D04 833 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 PDGFRLQ15198 375 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 PMS2CLQ68D20 193 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 TCEAL6Q6IPX3 200 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 DSTYKQ6XUX3 929 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 KCTD17Q8N5Z5 321 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 NSUN7Q8NE18 718 aaKnown RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 TCEAL3Q969E4 200 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 ACDQ96AP0 544 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 ZBTB45Q96K62 511 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 GCNAQ96QF7 691 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 TMEM9BQ9NQ34 198 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 LRWD1Q9UFC0 647 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 EVLQ9UI08 416 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
VIRMA-208ENST00000523263 TIMM13Q9Y5L4 95 aaPredicted RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 CNOT1A5YKK6 2376 aaKnown RBP10.27□□□□□ -0.77
VIRMA-208ENST00000523263 ATRXP46100 2492 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 OTOL1A6NHN0 477 aaPredicted RBP10.26□□□□□ -0.77
VIRMA-208ENST00000523263 CDX4O14627 284 aaPredicted RBP10.26□□□□□ -0.77
VIRMA-208ENST00000523263 KHNYNO15037 678 aaKnown RBP10.26□□□□□ -0.77
VIRMA-208ENST00000523263 HIP1RO75146 1068 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 EGFP01133 1207 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 SCP2P22307 547 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 GUCY2CP25092 1073 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 TRAPPC10P48553 1259 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 LILRA4P59901 499 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 ANAPC15P60006 121 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 CREB5Q02930 508 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 FOXC1Q12948 553 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 STRN3Q13033 797 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 C1orf186Q6ZWK4 172 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 CD302Q8IX05 232 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 C4orf32Q8N8J7 132 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 IGSF22Q8N9C0 903 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 TMEM161BQ8NDZ6 487 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 SPPL2BQ8TCT7 592 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 P2RY13Q9BPV8 354 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 SCNM1Q9BWG6 230 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 ZCWPW1Q9H0M4 648 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 DDX19AQ9NUU7 478 aaKnown RBP10.26□□□□□ -0.77
VIRMA-208ENST00000523263 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 DSEQ9UL01 958 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 DNM3Q9UQ16 869 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 NEUROG3Q9Y4Z2 214 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
VIRMA-208ENST00000523263 UPK3BL1B0FP48 263 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms