RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NFIL3Q16649 462 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 PPM1LQ5SGD2 360 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 CENPPQ6IPU0 288 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 LRRTM3Q86VH5 581 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 PDCL2Q8N4E4 241 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 HPDLQ96IR7 371 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
DENND3-220ENST00000523066 PRKD2Q9BZL6 878 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
DENND3-220ENST00000523066 HCFC1R1Q9NWW0 138 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 NME7Q9Y5B8 376 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 VCANP13611 3396 aa11.3□□□□□ -0.6
DENND3-220ENST00000523066 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 TNFRSF10AO00220 468 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
DENND3-220ENST00000523066 SOAT2O75908 522 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 ATF2P15336 505 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 PNPLA4P41247 253 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 MTHFRP42898 656 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 VAMP7P51809 220 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 STX17P56962 302 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 CLDN10P78369 228 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 BIRC3Q13489 604 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 DSG2Q14126 1118 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 COBLL1Q53SF7 1204 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 C15orf39Q6ZRI6 1047 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
DENND3-220ENST00000523066 FAM186BQ8IYM0 893 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 ATAD1Q8NBU5 361 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
DENND3-220ENST00000523066 CMASQ8NFW8 434 aaPredicted RBP11.29□□□□□ -0.6
DENND3-220ENST00000523066 GPT2Q8TD30 523 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 TMLHEQ9NVH6 421 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 GDAP2Q9NXN4 497 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 FRMD4BQ9Y2L6 1034 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
DENND3-220ENST00000523066 MTMR11A4FU01 709 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 OR6C75A6NL08 312 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 PRRG1O14668 218 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 PHACTR2O75167 634 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 ATP2C2O75185 946 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 C1RP00736 705 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 CCNE1P24864 410 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 LMO2P25791 158 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 ELF1P32519 619 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 PSMC2P35998 433 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 GCLMP48507 274 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 DUSP4Q13115 394 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 GPR17Q13304 367 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 NELFBQ8WX92 580 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 MRPL45Q9BRJ2 306 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 XYLT2Q9H1B5 865 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 CLSTN2Q9H4D0 955 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 ZDHHC7Q9NXF8 308 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 DNMT3BQ9UBC3 853 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
DENND3-220ENST00000523066 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 DSEQ9UL01 958 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 INSL5Q9Y5Q6 135 aa11.28□□□□□ -0.6
DENND3-220ENST00000523066 PTPRDP23468 1912 aa11.27□□□□□ -0.6
DENND3-220ENST00000523066 CETN3O15182 167 aa11.27□□□□□ -0.61
DENND3-220ENST00000523066 MAPK13O15264 365 aa11.27□□□□□ -0.61
DENND3-220ENST00000523066 HUS1O60921 280 aa11.27□□□□□ -0.61
DENND3-220ENST00000523066 CLSTN1O94985 981 aa11.27□□□□□ -0.61
DENND3-220ENST00000523066 PAPLNO95428 1278 aa11.27□□□□□ -0.61
DENND3-220ENST00000523066 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.61
DENND3-220ENST00000523066 RAP1GAPP47736 663 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms