RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 TPRP12270 2363 aaKnown RBP10.18□□□□□ -0.78
SDC2-207ENST00000522911 VWA3AA6NCI4 1184 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 SPECC1L-ADORA2AF8WAN1 911 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 TRAK2O60296 914 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 CCNE1P24864 410 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 CDC25CP30307 473 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 LONP1P36776 959 aaKnown RBP10.18□□□□□ -0.78
SDC2-207ENST00000522911 RAD51AP2Q09MP3 1159 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 ARHGAP15Q53QZ3 475 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 WDR44Q5JSH3 913 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 DSTYKQ6XUX3 929 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 LONP2Q86WA8 852 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 YAF2Q8IY57 180 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 ATAD1Q8NBU5 361 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 SPATA18Q8TC71 538 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 HVCN1Q96D96 273 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 BICD1Q96G01 975 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 CALML4Q96GE6 196 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 LOXL4Q96JB6 756 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 LRRC3BQ96PB8 259 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 SLITRK6Q9H5Y7 841 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 TASP1Q9H6P5 420 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 PARD6AQ9NPB6 346 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 BLOC1S4Q9NUP1 217 aa10.18□□□□□ -0.78
SDC2-207ENST00000522911 CDV3Q9UKY7 258 aaKnown RBP10.18□□□□□ -0.78
SDC2-207ENST00000522911 TIMM13Q9Y5L4 95 aaPredicted RBP10.18□□□□□ -0.78
SDC2-207ENST00000522911 TICRRQ7Z2Z1 1910 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
SDC2-207ENST00000522911 LAMA1P25391 3075 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 SLC30A4O14863 429 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 GJA1P17302 382 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 DDX6P26196 483 aaKnown RBP eCLIP10.17□□□□□ -0.78
SDC2-207ENST00000522911 UBA7P41226 1012 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 SATB1Q01826 763 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 TMEM132DQ14C87 1099 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 PTPAQ15257 358 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 CSRP2Q16527 193 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 JADE1Q6IE81 842 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 BRAPQ7Z569 592 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 WDR5BQ86VZ2 330 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 OR10T2Q8NGX3 314 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 BPIFB1Q8TDL5 484 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 LRRC15Q8TF66 581 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
SDC2-207ENST00000522911 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 STRA6Q9BX79 667 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 IL21Q9HBE4 155 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
SDC2-207ENST00000522911 MORC2Q9Y6X9 1032 aaPredicted RBP10.17□□□□□ -0.78
SDC2-207ENST00000522911 KIF26AQ9ULI4 1882 aaPredicted RBP10.17□□□□□ -0.78
SDC2-207ENST00000522911 MYH11P35749 1972 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 NPHP3-ACAD11A0A0J9YXS1 232 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 K7ENM7 598 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 DPYSL4O14531 572 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 PPEF2O14830 753 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 PPP1R37O75864 691 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 AKAP3O75969 853 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 FAM13AO94988 1023 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 IL18RAPO95256 599 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 OR4Q2P0C623 313 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 ATF6P18850 670 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 GABRR2P28476 465 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 DDIT3P35638 169 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 PNPLA4P41247 253 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 MATR3P43243 847 aaKnown RBP eCLIP10.16□□□□□ -0.788e-7■■□□□ 13.3
SDC2-207ENST00000522911 MCM2P49736 904 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 TAF6P49848 677 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 KPNA1P52294 538 aaPredicted RBP10.16□□□□□ -0.78
SDC2-207ENST00000522911 LIMK1P53667 647 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 SPAG1Q07617 926 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 ZNF268Q14587 947 aaPredicted RBP10.16□□□□□ -0.78
SDC2-207ENST00000522911 VEPH1Q14D04 833 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 POSTNQ15063 836 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 STXBP5Q5T5C0 1151 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 MCTP1Q6DN14 999 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 TXNDC11Q6PKC3 985 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 CMTM8Q8IZV2 173 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 MYCT1Q8N699 235 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 TTC9BQ8N6N2 239 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
SDC2-207ENST00000522911 LARP4BQ92615 738 aaKnown RBP10.16□□□□□ -0.78
SDC2-207ENST00000522911 RAD54LQ92698 747 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 TMX3Q96JJ7 454 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 PGLYRP2Q96PD5 576 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 FAM83CQ9BQN1 747 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 ATXN3LQ9H3M9 355 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 ABCB6Q9NP58 842 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 THG1LQ9NWX6 298 aaKnown RBP10.16□□□□□ -0.78
SDC2-207ENST00000522911 USP18Q9UMW8 372 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 TSC2P49815 1807 aa10.16□□□□□ -0.78
SDC2-207ENST00000522911 SPTBN2O15020 2390 aa10.15□□□□□ -0.78
SDC2-207ENST00000522911 SLC38A8A6NNN8 435 aa10.15□□□□□ -0.78
SDC2-207ENST00000522911 CHURC1-FNTBB4DL54 471 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms