RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 HPDLQ96IR7 371 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 GSDMAQ96QA5 445 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 ZCWPW1Q9H0M4 648 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 LIMD1Q9UGP4 676 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 SLC27A5Q9Y2P5 690 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 YIPF1Q9Y548 306 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 VNN1O95497 513 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 TRIM49P0CI25 452 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 TRIM49CP0CI26 452 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 ELF1P32519 619 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 MYL6P60660 151 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 UBE2HP62256 183 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 TWF1Q12792 350 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 DUSP4Q13115 394 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 GPR17Q13304 367 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 SLC5A9Q2M3M2 681 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 SLC39A12Q504Y0 691 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 HS6ST3Q8IZP7 471 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 KBTBD7Q8WVZ9 684 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 ING5Q8WYH8 240 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 XYLT2Q9H1B5 865 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 CEP72Q9P209 647 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 NR2E1Q9Y466 385 aa19.2■□□□□ 0.66
CLK4-211ENST00000522556 SMC2O95347 1197 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 PAX3P23760 479 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 GBP2P32456 591 aaPredicted RBP19.19■□□□□ 0.66
CLK4-211ENST00000522556 CLDN10P78369 228 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 MYBPC2Q14324 1141 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 CAMK4Q16566 473 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 NFIL3Q16649 462 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 UVSSAQ2YD98 709 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 CENPPQ6IPU0 288 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 RSAD2Q8WXG1 361 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 DNAJC25Q9H1X3 360 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 DSEQ9UL01 958 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 USTQ9Y2C2 406 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 TECTAO75443 2155 aa19.19■□□□□ 0.66
CLK4-211ENST00000522556 HUS1O60921 280 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 LRRN2O75325 713 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 LRG1P02750 347 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 C4BPAP04003 597 aaKnown RBP19.18■□□□□ 0.66
CLK4-211ENST00000522556 FSHRP23945 695 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 CCR2P41597 374 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 ANKRD40Q6AI12 368 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 CYP26C1Q6V0L0 522 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 LIMS2Q7Z4I7 341 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 ZDHHC14Q8IZN3 488 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 ADSSL1Q8N142 457 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 STKLD1Q8NE28 680 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 TCEAL4Q96EI5 215 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 PKMYT1Q99640 499 aa19.18■□□□□ 0.66
CLK4-211ENST00000522556 MRPL45Q9BRJ2 306 aaKnown RBP19.18■□□□□ 0.66
CLK4-211ENST00000522556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLK4-211ENST00000522556 DDX43Q9NXZ2 648 aaKnown RBP19.18■□□□□ 0.66
CLK4-211ENST00000522556 TRIOO75962 3097 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 GABRDO14764 452 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 ATP2C2O75185 946 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 XYLBO75191 536 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 KIF20AO95235 890 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 RHOP08100 348 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 POU2F2P09086 479 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 CEBPBP17676 345 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 LMO2P25791 158 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 PSMC1P62191 440 aaKnown RBP19.17■□□□□ 0.66
CLK4-211ENST00000522556 PPP3CAQ08209 521 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 ADAM9Q13443 819 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 BIRC3Q13489 604 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 PTPN21Q16825 1174 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 PABPC1LQ4VXU2 614 aaKnown RBP19.17■□□□□ 0.66
CLK4-211ENST00000522556 COBLL1Q53SF7 1204 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 OTOP3Q7RTS5 596 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 ELOA2Q8IYF1 753 aaPredicted RBP19.17■□□□□ 0.66
CLK4-211ENST00000522556 FAM186BQ8IYM0 893 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 TMC2Q8TDI7 906 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 LPIN3Q9BQK8 851 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 CORO1BQ9BR76 489 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 SMYD3Q9H7B4 428 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 FRMD4BQ9Y2L6 1034 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 PTPRDP23468 1912 aa19.17■□□□□ 0.66
CLK4-211ENST00000522556 GJA1P17302 382 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 ATF6P18850 670 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 GPR15P49685 360 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 VAMP7P51809 220 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 MYO1EQ12965 1108 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 MORC3Q14149 939 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 EDRF1Q3B7T1 1238 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 PRSS36Q5K4E3 855 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 SPOPLQ6IQ16 392 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 KLHL10Q6JEL2 608 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 SV2AQ7L0J3 742 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 FGF13Q92913 245 aa19.16■□□□□ 0.66
CLK4-211ENST00000522556 IPO9Q96P70 1041 aaKnown RBP19.16■□□□□ 0.66
CLK4-211ENST00000522556 OXCT2Q9BYC2 517 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms