RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF658Q5TYW1 1059 aaPredicted RBP22.2■■□□□ 1.14
TRIM35-203ENST00000521253 ATAD1Q8NBU5 361 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 ZCWPW1Q9H0M4 648 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 C11orf16Q9NQ32 467 aa22.2■■□□□ 1.14
TRIM35-203ENST00000521253 MTMR11A4FU01 709 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 FAM86C2PA6NEL3 165 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 LRRIQ3A6PVS8 624 aaPredicted RBP22.19■■□□□ 1.14
TRIM35-203ENST00000521253 ASGR2P07307 311 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 PRCPP42785 496 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 CLDN10P78369 228 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 TWF1Q12792 350 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 DUSP4Q13115 394 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 PABPC1LQ4VXU2 614 aaKnown RBP22.19■■□□□ 1.14
TRIM35-203ENST00000521253 SLC39A12Q504Y0 691 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 CENPPQ6IPU0 288 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 TMEM86AQ8N2M4 240 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 TOP6BLQ8N6T0 577 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.19■■□□□ 1.14
TRIM35-203ENST00000521253 FRMD4BQ9Y2L6 1034 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 YIPF1Q9Y548 306 aa22.19■■□□□ 1.14
TRIM35-203ENST00000521253 UBE2HP62256 183 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 DLG4P78352 724 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 ZXDAP98168 799 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 SOWAHAQ2M3V2 549 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 LRRTM3Q86VH5 581 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 EDAQ92838 391 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 EPS15L1Q9UBC2 864 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 SLC27A5Q9Y2P5 690 aa22.18■■□□□ 1.14
TRIM35-203ENST00000521253 AKAP3O75969 853 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 RHOP08100 348 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 PTPN2P17706 415 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 RPL13P26373 211 aaKnown RBP22.17■■□□□ 1.14
TRIM35-203ENST00000521253 CDR1P51861 262 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 AP3M2P53677 418 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 COBLL1Q53SF7 1204 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 TDRD10Q5VZ19 366 aaKnown RBP22.17■■□□□ 1.14
TRIM35-203ENST00000521253 LIMS2Q7Z4I7 341 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 OSTM1Q86WC4 334 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 ADGRF2Q8IZF7 708 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 TTC9BQ8N6N2 239 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 ITFG1Q8TB96 612 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 DDX43Q9NXZ2 648 aaKnown RBP22.17■■□□□ 1.14
TRIM35-203ENST00000521253 CEP72Q9P209 647 aa22.17■■□□□ 1.14
TRIM35-203ENST00000521253 MAPK13O15264 365 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 GPR37L1O60883 481 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 PHACTR2O75167 634 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 LAMP2P13473 410 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 TSPY1Q01534 308 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 ADAM9Q13443 819 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 BIRC3Q13489 604 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 TRPC3Q13507 836 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 SLC5A9Q2M3M2 681 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 EDRF1Q3B7T1 1238 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 TMEM31Q5JXX7 168 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 DPH6Q7L8W6 267 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 DCP1BQ8IZD4 617 aaKnown RBP22.16■■□□□ 1.14
TRIM35-203ENST00000521253 SPATA18Q8TC71 538 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 TMC2Q8TDI7 906 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 ACBD6Q9BR61 282 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 CORO1BQ9BR76 489 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 MAN1B1Q9UKM7 699 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 SORCS3Q9UPU3 1222 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 DOCK6Q96HP0 2047 aa22.16■■□□□ 1.14
TRIM35-203ENST00000521253 GABRDO14764 452 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 HCRTO43612 131 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 C4BPAP04003 597 aaKnown RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 ACAT1P24752 427 aaKnown RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 LHX1P48742 406 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 MYL6P60660 151 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 MYL7Q01449 175 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 MTMR3Q13615 1198 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 C1orf220Q5T0J3 134 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 ISM2Q6H9L7 571 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 FAM186BQ8IYM0 893 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 ADSSL1Q8N142 457 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 ELMOD1Q8N336 334 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 KBTBD7Q8WVZ9 684 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 FGF13Q92913 245 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 ZNF512Q96ME7 567 aaPredicted RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 MMS19Q96T76 1030 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 GTPBP4Q9BZE4 634 aaKnown RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 XYLT2Q9H1B5 865 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 KCNK12Q9HB15 430 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 AVENQ9NQS1 362 aaPredicted RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 TMLHEQ9NVH6 421 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 HSFX1Q9UBD0 423 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 CDH7Q9ULB5 785 aa22.15■■□□□ 1.14
TRIM35-203ENST00000521253 MRPS23Q9Y3D9 190 aaKnown RBP22.15■■□□□ 1.14
TRIM35-203ENST00000521253 SOAT2O75908 522 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 STAU1O95793 577 aaKnown RBP22.14■■□□□ 1.13
TRIM35-203ENST00000521253 PSMC2P35998 433 aaKnown RBP22.14■■□□□ 1.13
TRIM35-203ENST00000521253 ALDH1A3P47895 512 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 VAMP7P51809 220 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 SMARCB1Q12824 385 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 PLD1Q13393 1074 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 NCOA4Q13772 614 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 WDR72Q3MJ13 1102 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 IQCEQ6IPM2 695 aa22.14■■□□□ 1.13
TRIM35-203ENST00000521253 INTS8Q75QN2 995 aaKnown RBP22.14■■□□□ 1.13
TRIM35-203ENST00000521253 HS6ST3Q8IZP7 471 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms