RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SCARA3Q6AZY7 606 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 CBWD2Q8IUF1 395 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 CSGALNACT2Q8N6G5 542 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 NOC3LQ8WTT2 800 aaKnown RBP18.38■□□□□ 0.53
SQLE-205ENST00000521232 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 CHAMP1Q96JM3 812 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 LRRC3Q9BY71 257 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 DNAJC25Q9H1X3 360 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 SLC39A2Q9NP94 309 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 AGPAT3Q9NRZ7 376 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 INTS13Q9NVM9 706 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 USP25Q9UHP3 1055 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 HPSEQ9Y251 543 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 SLC27A5Q9Y2P5 690 aa18.38■□□□□ 0.53
SQLE-205ENST00000521232 FAM237AA0A1B0GTK4 181 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 TULP1O00294 542 aaPredicted RBP18.37■□□□□ 0.53
SQLE-205ENST00000521232 NRG2O14511 850 aaPredicted RBP18.37■□□□□ 0.53
SQLE-205ENST00000521232 GALR2O43603 387 aaPredicted RBP18.37■□□□□ 0.53
SQLE-205ENST00000521232 PI15O43692 258 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 KLRC4O43908 158 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ECI2O75521 394 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 PFKFB1P16118 471 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ALDH1A3P47895 512 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 EPHB3P54753 998 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 RBP5P82980 135 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 SMARCB1Q12824 385 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 SLC39A12Q504Y0 691 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 LRRTM3Q86VH5 581 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 GRAMD1CQ8IYS0 662 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ASAH2Q9NR71 780 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 GDAP2Q9NXN4 497 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 CGNQ9P2M7 1197 aaKnown RBP18.37■□□□□ 0.53
SQLE-205ENST00000521232 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 CA14Q9ULX7 337 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ASB3Q9Y575 518 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
SQLE-205ENST00000521232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.36■□□□□ 0.53
SQLE-205ENST00000521232 CLIC2O15247 247 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 TMEM191BP0C7N4 346 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 TUFMP49411 452 aaKnown RBP18.36■□□□□ 0.53
SQLE-205ENST00000521232 DUOXA2Q1HG44 320 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 TANGO2Q6ICL3 276 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 PHLDB3Q6NSJ2 640 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 NELFCDQ8IXH7 590 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 C12orf56Q8IXR9 622 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 OR5B17Q8NGF7 314 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 C2orf15Q8WU43 125 aaKnown RBP18.36■□□□□ 0.53
SQLE-205ENST00000521232 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 ANKRD36BP1Q96IX9 119 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 FAM84AQ96KN4 292 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 KXD1Q9BQD3 176 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 MTMR12Q9C0I1 747 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 SCAND2PQ9GZW5 306 aaPredicted RBP18.36■□□□□ 0.53
SQLE-205ENST00000521232 IRF2BPLQ9H1B7 796 aa18.36■□□□□ 0.53
SQLE-205ENST00000521232 PTPRJQ12913 1337 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 HUS1O60921 280 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 MYL1P05976 194 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 KRT19P08727 400 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 MYL4P12829 197 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 PSMD2Q13200 908 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 SNRNP35Q16560 246 aaKnown RBP18.35■□□□□ 0.53
SQLE-205ENST00000521232 KNOP1Q1ED39 458 aaKnown RBP18.35■□□□□ 0.53
SQLE-205ENST00000521232 FAM78AQ5JUQ0 283 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 LMBRD2Q68DH5 695 aaPredicted RBP18.35■□□□□ 0.53
SQLE-205ENST00000521232 HS2ST1Q7LGA3 356 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 DNAJB7Q7Z6W7 309 aaPredicted RBP18.35■□□□□ 0.53
SQLE-205ENST00000521232 TMC8Q8IU68 726 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 WDR49Q8IV35 697 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 DCP1BQ8IZD4 617 aaKnown RBP18.35■□□□□ 0.53
SQLE-205ENST00000521232 TMEM86AQ8N2M4 240 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 PDCL2Q8N4E4 241 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 TTC9BQ8N6N2 239 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 XXYLT1Q8NBI6 393 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 RDH13Q8NBN7 331 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 SPPL2BQ8TCT7 592 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 PSMG2Q969U7 264 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 ASB16Q96NS5 453 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 PLA2G2FQ9BZM2 168 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 GPR88Q9GZN0 384 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 ARHGEF3Q9NR81 526 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 L1RE1Q9UN81 338 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 MYO15AQ9UKN7 3530 aa18.35■□□□□ 0.53
SQLE-205ENST00000521232 DMDP11532 3685 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 USP34Q70CQ2 3546 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 STK25O00506 426 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 TNNC2P02585 160 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 FCARP24071 287 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 STARD6P59095 220 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 PFKPQ01813 784 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 BFSP1Q12934 665 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 STK4Q13043 487 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 DPH6Q7L8W6 267 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 TOP6BLQ8N6T0 577 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 SHKBP1Q8TBC3 707 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 SPATA18Q8TC71 538 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 ZSWIM3Q96MP5 696 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 ACBD6Q9BR61 282 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 TBC1D17Q9HA65 648 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 ZFP14Q9HCL3 533 aa18.34■□□□□ 0.53
SQLE-205ENST00000521232 SNX9Q9Y5X1 595 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms