RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 C2CD2LO14523 706 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 GSC2O15499 205 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 TBX10O75333 385 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 BBOX1O75936 387 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 P4HBP07237 508 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 BRD2P25440 801 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 EPHB1P54762 984 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SOX10P56693 466 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MOGSQ13724 837 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 AOC3Q16853 763 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 DAW1Q8N136 415 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 PDIK1LQ8N165 341 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC13A1Q9BZW2 595 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMEM8AQ9HCN3 771 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MAP3K13O43283 966 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 NPTXRO95502 500 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 ECE1P42892 770 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 BPIFB4P59827 614 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 B4GALNT2Q8NHY0 566 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 RANBP17Q9H2T7 1088 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 ZHX2Q9Y6X8 837 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 HNRNPCL1O60812 293 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MTA2O94776 668 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 ETS2P15036 469 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 GNA15P30679 374 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 ALDH18A1P54886 795 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 PPP2R5CQ13362 524 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 RBM41Q96IZ5 413 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 FIZ1Q96SL8 496 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 MIPEPQ99797 713 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 VCX3BQ9H321 246 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 VCX3AQ9NNX9 186 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 SAR1AQ9NR31 198 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
TRAPPC9-208ENST00000520857 FCHO1O14526 889 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 QARSP47897 775 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 ALCAMQ13740 583 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 DNAJC24Q6P3W2 148 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 GALNT15Q8N3T1 639 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 WDR60Q8WVS4 1066 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 KCND2Q9NZV8 630 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 KIAA1551Q9HCM1 1747 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 IGLV3-22A0A075B6J6 115 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 CYP3A4P08684 503 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 SERPINB6P35237 376 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 NOVP48745 357 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 RPS6KA3P51812 740 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 RASA2Q15283 850 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 DPH6Q7L8W6 267 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 ARID3BQ8IVW6 561 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 PPM1NQ8N819 430 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 CFAP36Q96G28 342 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 IMPG2Q9BZV3 1241 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 MROH7Q68CQ1 1323 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 COPEO14579 308 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 TP73O15350 636 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 TCEA3O75764 348 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 FDX1P10109 184 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 EIF2AK2P19525 551 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 LIG4P49917 911 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 CCNG1P51959 295 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 NFIL3Q16649 462 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 C11orf91Q3C1V1 193 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 FBXO36Q8NEA4 188 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 TCHPQ9BT92 498 aa13.49□□□□□ -0.25
TRAPPC9-208ENST00000520857 FAM237BA0A1B0GVD1 139 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 GSTA2P09210 222 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 HELQQ8TDG4 1101 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 SLCO2A1Q92959 643 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 PRR11Q96HE9 360 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 CLPTM1LQ96KA5 538 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 ACAP3Q96P50 834 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 MCEEQ96PE7 176 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 SHCBP1LQ9BZQ2 653 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 FOXP3Q9BZS1 431 aa13.48□□□□□ -0.25
TRAPPC9-208ENST00000520857 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms