RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 AJAP1Q9UKB5 411 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 GTF3C4Q9UKN8 822 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 KIAA0391O15091 583 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 CHMP2AO43633 222 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 SORBS3O60504 671 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 RASSF9O75901 435 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM49P0CI25 452 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM49CP0CI26 452 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 MYBL1P10243 752 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 TXNP10599 105 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 RARGP13631 454 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 CETN2P41208 172 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 PLTPP55058 493 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 RWDD2BP57060 319 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 RPS6P62753 249 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 XRCC4Q13426 336 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 PPP1R7Q15435 360 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM117BQ6P1L5 589 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 CYB5D1Q6P9G0 228 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 GJB7Q6PEY0 223 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC137Q6PK04 289 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 XXYLT1Q8NBI6 393 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 VWCEQ96DN2 955 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 FAM122AQ96E09 287 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 IFT74Q96LB3 600 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 LXNQ9BS40 222 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 CELF4Q9BZC1 486 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 FOXP3Q9BZS1 431 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 ST6GALNAC4Q9H4F1 302 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 OSGEPQ9NPF4 335 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 WHRNQ9P202 907 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 Q9Y3F1 56 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 MTCH2Q9Y6C9 303 aa9.18□□□□□ -0.94
CTNNA1-223ENST00000520520 TTC28Q96AY4 2481 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 EMSYQ7Z589 1322 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 IGSF9BQ9UPX0 1349 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CCT8L1PA6NM43 557 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 H0YCG3 227 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 O00370 1275 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 EML1O00423 815 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 RASGRF2O14827 1237 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 TLL1O43897 1013 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 DKC1O60832 514 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 HIP1RO75146 1068 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 LRRN2O75325 713 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SLITRK3O94933 977 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 ARIH2O95376 493 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CFBP00751 764 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PFKMP08237 780 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 IQCF3P0C7M6 154 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 BMP1P13497 986 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PLS3P13797 630 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CHN1P15882 459 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SCP2P22307 547 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 GTF2H1P32780 548 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SLC1A1P43005 524 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PTGIRP43119 386 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SCTRP47872 440 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 TAP1Q03518 808 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 TRADDQ15628 312 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PTPROQ16827 1216 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 AAK1Q2M2I8 961 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CBWD6Q4V339 395 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 EPC2Q52LR7 807 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CBWD3Q5JTY5 395 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CBWD5Q5RIA9 395 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 DCAF12L1Q5VU92 463 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 MIER3Q7Z3K6 550 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 MCF2L2Q86YR7 1114 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SLC13A5Q86YT5 568 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC105Q8IYK2 499 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 RIBC1Q8N443 379 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF564Q8TBZ8 553 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 GDPD5Q8WTR4 605 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CLEC4DQ8WXI8 215 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF653Q96CK0 615 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 ARHGEF26Q96DR7 871 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SERPINB12Q96P63 405 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 MPHOSPH6Q99547 160 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC77Q9BR77 488 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 GPR88Q9GZN0 384 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-223ENST00000520520 RGL1Q9NZL6 768 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms