RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 MATR3P43243 847 aaKnown RBP eCLIP20.61■□□□□ 0.896e-8■■■■□ 24.8
CTNNA1-213ENST00000519113 SHC2P98077 582 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 MCL1Q07820 350 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 SF3A2Q15428 464 aaKnown RBP20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 ITPRIPL2Q3MIP1 535 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 N4BP2L1Q5TBK1 243 aaPredicted RBP20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 OVOS1Q6IE37 1185 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 ARMCX5Q6P1M9 558 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 CCDC83Q8IWF9 413 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 ATAD1Q8NBU5 361 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 BPIFB1Q8TDL5 484 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 HSFX1Q9UBD0 423 aa20.61■□□□□ 0.89
CTNNA1-213ENST00000519113 TTC26A0AVF1 554 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 TM4SF5O14894 197 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 ATG13O75143 517 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 RPP40O75818 363 aaKnown RBP20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 EPN2O95208 641 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 TYMPP19971 482 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 GUCY2CP25092 1073 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 RAP1GAPP47736 663 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 ZBTB6Q15916 424 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 TMEM161BQ8NDZ6 487 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 TMEM209Q96SK2 561 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 TASP1Q9H6P5 420 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 SMC3Q9UQE7 1217 aa20.6■□□□□ 0.89
CTNNA1-213ENST00000519113 MTMR11A4FU01 709 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 EXTL3O43909 919 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 MAPTP10636 758 aaKnown RBP20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 PLS3P13797 630 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 PAX3P23760 479 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 SPAG1Q07617 926 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 TNK2Q07912 1038 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 VEPH1Q14D04 833 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 KYAT1Q16773 422 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 STPG1Q5TH74 334 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 GCNAQ96QF7 691 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 TSPAN18Q96SJ8 248 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 SLC8A2Q9UPR5 921 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 PCDHGA5Q9Y5G8 931 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 RALGAPA1Q6GYQ0 2036 aa20.59■□□□□ 0.89
CTNNA1-213ENST00000519113 CITO14578 2027 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 AKAP3O75969 853 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 CCDC192P0DO97 292 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 CDC25CP30307 473 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 TUFMP49411 452 aaKnown RBP20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 GRSF1Q12849 480 aaKnown RBP eCLIP20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 CCDC6Q16204 474 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 KBTBD6Q86V97 674 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 ZMYM5Q9UJ78 669 aa20.58■□□□□ 0.89
CTNNA1-213ENST00000519113 H0YCG3 227 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 PRAMEF12O95522 483 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 ODC1P11926 461 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 LAMA1P25391 3075 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 HOXC13P31276 330 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 PXNP49023 591 aaPredicted RBP20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 ST3GAL1Q11201 340 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 NBR1Q14596 966 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 TMEM130Q8N3G9 435 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 BICD1Q96G01 975 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 CEP295Q9C0D2 2601 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 CACNA1GO43497 2377 aa20.57■□□□□ 0.88
CTNNA1-213ENST00000519113 PP2D1A8MPX8 630 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 LACTBL1A8MY62 500 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 LAD1O00515 517 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 SOAT2O75908 522 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 LILRA4P59901 499 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 AMPD2Q01433 879 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 TAF12Q16514 161 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 TMEM196Q5HYL7 178 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 PLA2G2CQ5R387 149 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 CAMKK1Q8N5S9 505 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 TTC9BQ8N6N2 239 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 SENP8Q96LD8 212 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 SEPT5Q99719 369 aaPredicted RBP20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 LSM14BQ9BX40 385 aaKnown RBP20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 GKN1Q9NS71 199 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 RXFP3Q9NSD7 469 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 PDCD11Q14690 1871 aaKnown RBP20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 FRYQ5TBA9 3013 aa20.56■□□□□ 0.88
CTNNA1-213ENST00000519113 CDC25AP30304 524 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 PRPHP41219 470 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 CYP4F8P98187 520 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 MGAT5BQ3V5L5 792 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 DTHD1Q6ZMT9 781 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 KCTD17Q8N5Z5 321 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 ZC3H10Q96K80 434 aaKnown RBP20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 LPIN3Q9BQK8 851 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 HAPLN2Q9GZV7 340 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 RPF1Q9H9Y2 349 aaKnown RBP20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 VPS45Q9NRW7 570 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 KCND2Q9NZV8 630 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 SDK1Q7Z5N4 2213 aa20.55■□□□□ 0.88
CTNNA1-213ENST00000519113 TRDMT1O14717 391 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms