RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 INTS13Q9NVM9 706 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 PCDHA6Q9UN73 950 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 G3BP2Q9UN86 482 aaKnown RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 PRPF3O43395 683 aaKnown RBP4.75□□□□□ -1.65
SKP1-205ENST00000519054 LMNAP02545 664 aaKnown RBP4.75□□□□□ -1.65
SKP1-205ENST00000519054 TYRP1P17643 537 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 HDCP19113 662 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 HTR1BP28222 390 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 GTF2H3Q13889 308 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 PPP2R5AQ15172 486 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 TAF2Q6P1X5 1199 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 B3GNT9Q6UX72 402 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 TMPRSS9Q7Z410 1059 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 USP37Q86T82 979 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 CHPFQ8IZ52 775 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 PSD4Q8NDX1 1056 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 SLC35G2Q8TBE7 412 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 LPIN2Q92539 896 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 MTFMTQ96DP5 389 aaKnown RBP4.75□□□□□ -1.65
SKP1-205ENST00000519054 TAAR9Q96RI9 348 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 SMOC2Q9H3U7 446 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 RSAD1Q9HA92 442 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 SARS2Q9NP81 518 aaKnown RBP4.75□□□□□ -1.65
SKP1-205ENST00000519054 ETAA1Q9NY74 926 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 STAP2Q9UGK3 403 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 CPA4Q9UI42 421 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.75□□□□□ -1.65
SKP1-205ENST00000519054 EID1Q9Y6B2 187 aa4.75□□□□□ -1.65
SKP1-205ENST00000519054 H3BML4 177 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 YY2O15391 372 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 PEX1O43933 1283 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 UBXN7O94888 489 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 PPP3CBP16298 524 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 CXCR5P32302 372 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 IL12RB1P42701 662 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 NPTX2P47972 431 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 SOX8P57073 446 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 MRPS35P82673 323 aaKnown RBP4.74□□□□□ -1.65
SKP1-205ENST00000519054 HLXQ14774 488 aaPredicted RBP4.74□□□□□ -1.65
SKP1-205ENST00000519054 NFE2Q16621 373 aaPredicted RBP4.74□□□□□ -1.65
SKP1-205ENST00000519054 SMN1Q16637 294 aaKnown RBP4.74□□□□□ -1.65
SKP1-205ENST00000519054 ZBTB34Q8NCN2 500 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 TOR1AIP2Q8NFQ8 470 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 LRFN3Q9BTN0 628 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 SIK2Q9H0K1 926 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 LRIT1Q9P2V4 623 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 GABBR1Q9UBS5 961 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 ZNHIT2Q9UHR6 403 aa4.74□□□□□ -1.65
SKP1-205ENST00000519054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 E7ENX8 843 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 F5H697 171 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 KIAA0355O15063 1070 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 NUDT3O95989 172 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 SRGNP10124 158 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 KCNJ5P48544 419 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 NDUFV1P49821 464 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 RAB1AP62820 205 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 TAP2Q03519 686 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 CXorf57Q6NSI4 855 aaKnown RBP4.73□□□□□ -1.65
SKP1-205ENST00000519054 VWA1Q6PCB0 445 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 DAAM2Q86T65 1068 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 FAM9AQ8IZU1 332 aaPredicted RBP4.73□□□□□ -1.65
SKP1-205ENST00000519054 FAM46DQ8NEK8 389 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 ACTRT2Q8TDY3 377 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 DDX17Q92841 729 aaKnown RBP4.73□□□□□ -1.65
SKP1-205ENST00000519054 FBXL20Q96IG2 436 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 RIOX1Q9H6W3 641 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 SYNPO2LQ9H987 977 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 TCEAL9Q9UHQ7 104 aa4.73□□□□□ -1.65
SKP1-205ENST00000519054 A0A088AWK7 358 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 A0A0B4J269 797 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 CTNND1O60716 968 aaKnown RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 DNAJB5O75953 348 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 UNC5CO95185 931 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 PIM1P11309 404 aaPredicted RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 ITGALP20701 1170 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 FOLR3P41439 243 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 TOB1P50616 345 aaPredicted RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 HNRNPMP52272 730 aaKnown RBP eCLIP4.72□□□□□ -1.651e-11■■■■□ 25
SKP1-205ENST00000519054 SIM1P81133 766 aaPredicted RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 TUBB3Q13509 450 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 BOP1Q14137 746 aaKnown RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 FGL2Q14314 439 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 ZNF169Q14929 603 aaPredicted RBP4.72□□□□□ -1.65
SKP1-205ENST00000519054 ERCC6LQ2NKX8 1250 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 PRR16Q569H4 304 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 FAM102BQ5T8I3 360 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 EMC10Q5UCC4 262 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 PPP1R32Q7Z5V6 425 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 B3GALNT2Q8NCR0 500 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 MYCBPAPQ8TBZ2 947 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 TFAP2BQ92481 460 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
SKP1-205ENST00000519054 NT5C1BQ96P26 610 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms