RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 NDST4Q9H3R1 872 aa13.47□□□□□ -0.25
IGHV3-6-201ENST00000518407 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
IGHV3-6-201ENST00000518407 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
IGHV3-6-201ENST00000518407 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
IGHV3-6-201ENST00000518407 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 H7C4K7 107 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 HCRTO43612 131 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 HUS1O60921 280 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 TACC1O75410 805 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 GLP2RO95838 553 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 RAP1GAPP47736 663 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 NRIP1P48552 1158 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 NDUFV1P49821 464 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 COPB1P53618 953 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 SCARA5Q6ZMJ2 495 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 TATDN2Q93075 761 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 TMEM209Q96SK2 561 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 MRPL45Q9BRJ2 306 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 GCNT4Q9P109 453 aa13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
IGHV3-6-201ENST00000518407 MYO16Q9Y6X6 1858 aa13.46□□□□□ -0.26
IGHV3-6-201ENST00000518407 BECN2A8MW95 431 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 PER2O15055 1255 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 ADH1AP07327 375 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 CA8P35219 290 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 CLCN4P51793 760 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 ROR1Q01973 937 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 RAB33AQ14088 237 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 CTXN3Q4LDR2 81 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 METTL23Q86XA0 190 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 UBR7Q8N806 425 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 EHBP1Q8NDI1 1231 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 PKMYT1Q99640 499 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 VPS16Q9H269 839 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 TLE6Q9H808 572 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 SIX2Q9NPC8 291 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
IGHV3-6-201ENST00000518407 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 OR6C75A6NL08 312 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 LGALS16A8MUM7 142 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 VNN2O95498 520 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 C1RP00736 705 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 P4HA1P13674 534 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 SLC9A1P19634 815 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 OR1D2P34982 312 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 LHX1P48742 406 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 CDH8P55286 799 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 INCA1Q0VD86 236 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 LILRA6Q6PI73 481 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 GBP6Q6ZN66 633 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 RBM23Q86U06 439 aaKnown RBP13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 GLYCTKQ8IVS8 523 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 ARHGEF19Q8IW93 802 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 MICALL1Q8N3F8 863 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 EFHBQ8N7U6 833 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 PPP2R3CQ969Q6 453 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 ARID3AQ99856 593 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 ZCWPW1Q9H0M4 648 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 CYP3A43Q9HB55 503 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 DDX43Q9NXZ2 648 aaKnown RBP13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 FBXW11Q9UKB1 542 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 HCFC2Q9Y5Z7 792 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 ANAPC1Q9H1A4 1944 aa13.44□□□□□ -0.26
IGHV3-6-201ENST00000518407 C5orf42Q9H799 3197 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 LINC01565O15544 149 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 TGM5O43548 720 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 ABLIM3O94929 683 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 OR4Q2P0C623 313 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 EPCAMP16422 314 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 LMO2P25791 158 aa13.43□□□□□ -0.26
IGHV3-6-201ENST00000518407 KLRC2P26717 231 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms