RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 GET4Q7L5D6 327 aaPredicted RBP11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 OR10T2Q8NGX3 314 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 ZNF461Q8TAF7 563 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 PLEKHO2Q8TD55 490 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 HDAC7Q8WUI4 952 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 ZNF707Q96C28 371 aaPredicted RBP11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 EEF2KMTQ96G04 330 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 GSDMAQ96QA5 445 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MMRN2Q9H8L6 949 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 ZDHHC7Q9NXF8 308 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MAN1B1Q9UKM7 699 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 FRMD4BQ9Y2L6 1034 aa11.66□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 CLUHO75153 1309 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 BDP1A6H8Y1 2624 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 TRIM49BA6NDI0 452 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 OR6C75A6NL08 312 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 LRRIQ3A6PVS8 624 aaPredicted RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 PHACTR2O75167 634 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 OAZ2O95190 189 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 SEC24AO95486 1093 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 LRG1P02750 347 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 ACAT1P24752 427 aaKnown RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 DLG4P78352 724 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 FOXK1P85037 733 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 SLC39A12Q504Y0 691 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 KLHL10Q6JEL2 608 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 TRAPPC11Q7Z392 1133 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 GRASPQ7Z6J2 395 aaPredicted RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 CMASQ8NFW8 434 aaPredicted RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 CXorf38Q8TB03 319 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 ELMO3Q96BJ8 720 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MFSD14AQ96MC6 490 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 HCFC1R1Q9NWW0 138 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 DSEQ9UL01 958 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 L1RE1Q9UN81 338 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 TRAF3IP3Q9Y228 551 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 NR2E1Q9Y466 385 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 INSL5Q9Y5Q6 135 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MUC3AQ02505 3323 aa11.65□□□□□ -0.54
CTD-2270F17.1-201ENST00000518387 MYH10P35580 1976 aa11.65□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 HCRTO43612 131 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 HUS1O60921 280 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 XYLBO75191 536 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ABLIM3O94929 683 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 CYP11A1P05108 521 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ATF2P15336 505 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 RPL13P26373 211 aaKnown RBP11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 MYO1EQ12965 1108 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ADAM9Q13443 819 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TRPC3Q13507 836 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 STIM1Q13586 685 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 DSG2Q14126 1118 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 FAM186BQ8IYM0 893 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ADGRF2Q8IZF7 708 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 THEM5Q8N1Q8 247 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 PDCL2Q8N4E4 241 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TTC9BQ8N6N2 239 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 SPATA20Q8TB22 786 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 PARD3BQ8TEW8 1205 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ZNF516Q92618 1163 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 BORCS6Q96GS4 357 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 MMS19Q96T76 1030 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TSG101Q99816 390 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 RTP3Q9BQQ7 232 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 AFF4Q9UHB7 1163 aaKnown RBP11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 PTPRDP23468 1912 aa11.64□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 MTMR11A4FU01 709 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 SOAT2O75908 522 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 AKAP3O75969 853 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 C1RP00736 705 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 CST3P01034 146 aaPredicted RBP11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 HNRNPA1P09651 372 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 KRT13P13646 458 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 PAX3P23760 479 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 HOXA9P31269 272 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 VAMP7P51809 220 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 PMS1P54277 932 aaKnown RBP11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 MYL6P60660 151 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TNNC1P63316 161 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 TWF1Q12792 350 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 DUSP4Q13115 394 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 GPR17Q13304 367 aa11.63□□□□□ -0.55
CTD-2270F17.1-201ENST00000518387 ZCWPW2Q504Y3 356 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms