RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 PTGESO14684 152 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 MGEA5O60502 916 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 P4HA1P13674 534 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 MYO1EQ12965 1108 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 LPIN1Q14693 890 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 ZNF618Q5T7W0 954 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 PHF13Q86YI8 300 aaPredicted RBP24.85■■□□□ 1.57
SLIT3-204ENST00000518140 ERVK-5Q9HDB9 667 aa24.85■■□□□ 1.57
SLIT3-204ENST00000518140 A0A1W2PQ45 241 aaPredicted RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 A0A1W2PQY0 241 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 MOXD2PA6NHM9 499 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 DDX3YO15523 660 aaKnown RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 ATP8B1O43520 1251 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 IGFBP6P24592 240 aaPredicted RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 NDST1P52848 882 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 GPR161Q8N6U8 529 aaKnown RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 SPATA4Q8NEY3 305 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 TMEM176AQ96HP8 235 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 MRPL45Q9BRJ2 306 aaKnown RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 RNF216Q9NWF9 866 aaPredicted RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 RALGAPA2Q2PPJ7 1873 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 PIRO00625 290 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 GPR182O15218 404 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 SPTLC1O15269 473 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 TLR3O15455 904 aaKnown RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 GJB6O95452 261 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 CCDC181Q5TID7 509 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 ZNF572Q7Z3I7 529 aaPredicted RBP24.84■■□□□ 1.57
SLIT3-204ENST00000518140 PARD6BQ9BYG5 372 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 UVRAGQ9P2Y5 699 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 PCDHGC3Q9UN70 934 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 NME7Q9Y5B8 376 aa24.84■■□□□ 1.57
SLIT3-204ENST00000518140 PAEPP09466 180 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 COMTP21964 271 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 C11orf63Q6NUN7 778 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 TSEN34Q9BSV6 310 aaKnown RBP24.83■■□□□ 1.57
SLIT3-204ENST00000518140 AVENQ9NQS1 362 aaPredicted RBP24.83■■□□□ 1.57
SLIT3-204ENST00000518140 CHST12Q9NRB3 414 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 CACNG4Q9UBN1 327 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 CYTH4Q9UIA0 394 aa24.83■■□□□ 1.57
SLIT3-204ENST00000518140 BARX2Q9UMQ3 279 aaPredicted RBP24.83■■□□□ 1.57
SLIT3-204ENST00000518140 MMP8P22894 467 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 PTPN11Q06124 597 aaPredicted RBP24.82■■□□□ 1.56
SLIT3-204ENST00000518140 INCA1Q0VD86 236 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 ARHGEF6Q15052 776 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 CFAP221Q4G0U5 840 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 DCAF12L1Q5VU92 463 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 LRRC52Q8N7C0 313 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 GSTCDQ8NEC7 633 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 HEXIM2Q96MH2 286 aaKnown RBP24.82■■□□□ 1.56
SLIT3-204ENST00000518140 MIOSQ9NXC5 875 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 PAFAH1B1P43034 410 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 PLA2G4AP47712 749 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 MARCKSL1P49006 195 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 ALG3Q92685 438 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 KRT35Q92764 455 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 PNKPQ96T60 521 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 UNC93B1Q9H1C4 597 aa24.82■■□□□ 1.56
SLIT3-204ENST00000518140 CEP104O60308 925 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 MYBL1P10243 752 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 IBSPP21815 317 aaPredicted RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 PRMT2P55345 433 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 MRPS25P82663 173 aaKnown RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 MAMLD1Q13495 774 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 TMEM35BQ8NCS4 154 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 PBKQ96KB5 322 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 GAD1Q99259 594 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 STARD7Q9NQZ5 370 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 ANAPC7Q9UJX3 599 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 HCRTO43612 131 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 LSM8O95777 96 aaKnown RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 CD4P01730 458 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 ITGA4P13612 1032 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 MLH1P40692 756 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 C1QBPQ07021 282 aaKnown RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 PAK2Q13177 524 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 SOWAHAQ2M3V2 549 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 FAM26DQ5JW98 314 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 DPH6Q7L8W6 267 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 C12orf29Q8N999 325 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 SLC43A3Q8NBI5 491 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 PPP1R10Q96QC0 940 aaKnown RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 ST7Q9NRC1 585 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 RBM12Q9NTZ6 932 aaKnown RBP24.81■■□□□ 1.56
SLIT3-204ENST00000518140 TJP2Q9UDY2 1190 aa24.81■■□□□ 1.56
SLIT3-204ENST00000518140 RPLP2P05387 115 aaKnown RBP24.8■■□□□ 1.56
SLIT3-204ENST00000518140 CYP3A5P20815 502 aa24.8■■□□□ 1.56
SLIT3-204ENST00000518140 CDH5P33151 784 aaPredicted RBP24.8■■□□□ 1.56
SLIT3-204ENST00000518140 AGMOQ6ZNB7 445 aa24.8■■□□□ 1.56
SLIT3-204ENST00000518140 TRIM11Q96F44 468 aa24.8■■□□□ 1.56
SLIT3-204ENST00000518140 VCPIP1Q96JH7 1222 aa24.8■■□□□ 1.56
SLIT3-204ENST00000518140 RPGRIP1Q96KN7 1286 aa24.8■■□□□ 1.56
SLIT3-204ENST00000518140 CKBP12277 381 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 DSC3Q14574 896 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 LIN9Q5TKA1 542 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 PLEKHA7Q6IQ23 1121 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 TRAF7Q6Q0C0 670 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 CD101Q93033 1021 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 CALR3Q96L12 384 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms