RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 CDR2Q01850 454 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 CYP27A1Q02318 531 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
PABPC1-203ENST00000517921 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 TAF3Q5VWG9 929 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 VPS36Q86VN1 386 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 REXO1L1PQ8IX06 675 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 COLGALT2Q8IYK4 626 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ABI1Q8IZP0 508 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 KBTBD7Q8WVZ9 684 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 RSPH1Q8WYR4 309 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 RABGGTAQ92696 567 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
PABPC1-203ENST00000517921 PPP1R13BQ96KQ4 1090 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 TWNKQ96RR1 684 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-203ENST00000517921 L1RE1Q9UN81 338 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
PABPC1-203ENST00000517921 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 TACC1O75410 805 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 BAIAP3O94812 1187 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 KIF4AO95239 1232 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ITGB1P05556 798 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 MMEP08473 750 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 PAEPP09466 180 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 TNFAIP3P21580 790 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
PABPC1-203ENST00000517921 NDST1P52848 882 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ORC1Q13415 861 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 SPA17Q15506 151 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF394Q53GI3 561 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 C16orf59Q7L2K0 433 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 OSTM1Q86WC4 334 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ZNF677Q86XU0 584 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 BADQ92934 168 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 SENP8Q96LD8 212 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ZSWIM1Q9BR11 485 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.6
PABPC1-203ENST00000517921 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
PABPC1-203ENST00000517921 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
PABPC1-203ENST00000517921 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 NAGPAQ9UK23 515 aa11.28□□□□□ -0.6
PABPC1-203ENST00000517921 ATG2AQ2TAZ0 1938 aa11.27□□□□□ -0.6
PABPC1-203ENST00000517921 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 F8W810 466 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 CYB561D2O14569 222 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 CCP110O43303 1012 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 ZSCAN12O43309 604 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 THAP12O43422 761 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 ZNF500O60304 480 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 DGKIO75912 1065 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 B3GAT3O94766 335 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 UPP2O95045 317 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 AMHP03971 560 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 WARSP23381 471 aaKnown RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 VAV2P52735 878 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 KRT83P78385 493 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 FPGSQ05932 587 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 LRIT3Q3SXY7 679 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 PAN2Q504Q3 1202 aaKnown RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 TIGD5Q53EQ6 642 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 ALKBH5Q6P6C2 394 aaKnown RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 DPH6Q7L8W6 267 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 APPL2Q8NEU8 664 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 HASPINQ8TF76 798 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 ZNF606Q8WXB4 792 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 TFAP2BQ92481 460 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 PCDHB18PQ96TA0 734 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 SEPT11Q9NVA2 429 aaKnown RBP11.27□□□□□ -0.61
PABPC1-203ENST00000517921 TAS2R14Q9NYV8 317 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 PCDHA13Q9Y5I0 950 aa11.27□□□□□ -0.61
PABPC1-203ENST00000517921 I3L4J1 428 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 M0QZQ0 153 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 GABRDO14764 452 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 HCRTO43612 131 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 HUS1O60921 280 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms