RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SLC4A7Q9Y6M7 1214 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 A0A0G2JMZ2 1700 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CENPFP49454 3210 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FRMPD4Q14CM0 1322 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 A0A1W2PQ45 241 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 A0A1W2PQY0 241 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 VPS37CA5D8V6 355 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 FAM86C2PA6NEL3 165 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FAM86B1E9PN63 330 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 IPO5O00410 1097 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 MEIS1O00470 390 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 KPNA6O60684 536 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PQBP1O60828 265 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 ATP9AO75110 1047 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ADAMTS4O75173 837 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CABYRO75952 493 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 TDP2O95551 362 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 WNT11O96014 354 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 MT-CO1P00395 513 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 MMP3P08254 477 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CYP3A4P08684 503 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FAM86B2P0C5J1 330 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ZNF286BP0CG31 522 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 MYBL2P10244 700 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CAPN3P20807 821 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 POLR2BP30876 1174 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 ICAM3P32942 547 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CHKAP35790 457 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ARHGAP1Q07960 439 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PDE1CQ14123 709 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 BECN1Q14457 450 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ODF1Q14990 250 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PCBP2Q15366 365 aaKnown RBP eCLIP3.05□□□□□ -1.92
SKP1-204ENST00000517691 NPY5RQ15761 445 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SKOR2Q2VWA4 1001 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 SLC10A6Q3KNW5 377 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 HSDL1Q3SXM5 330 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FAM133BQ5BKY9 247 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 FAM47CQ5HY64 1035 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PPM1JQ5JR12 505 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GPR158Q5T848 1215 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 AGAP9Q5VTM2 703 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 METTL7BQ6UX53 244 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SLC39A5Q6ZMH5 540 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 TRMT1LQ7Z2T5 733 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 NEK8Q86SG6 692 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 TBC1D1Q86TI0 1168 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 C7orf61Q8IZ16 206 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 C7orf31Q8N865 590 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 KLHDC9Q8NEP7 349 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 FBXO18Q8NFZ0 1043 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PPTC7Q8NI37 304 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 PPP1R13LQ8WUF5 828 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 ATRIPQ8WXE1 791 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GLG1Q92896 1179 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SNX21Q969T3 373 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 HVCN1Q96D96 273 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CDK5RAP3Q96JB5 506 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 MTG1Q9BT17 334 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 CRB3Q9BUF7 120 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 CSRNP2Q9H175 543 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 UPF3AQ9H1J1 476 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 AZI2Q9H6S1 392 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 AGO4Q9HCK5 861 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 PRDM5Q9NQX1 630 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 SMYD2Q9NRG4 433 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 BLOC1S4Q9NUP1 217 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 SLC9A2Q9UBY0 812 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 TJP2Q9UDY2 1190 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 DDX25Q9UHL0 483 aaKnown RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 FBXO10Q9UK96 956 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 GPR52Q9Y2T5 361 aa3.05□□□□□ -1.92
SKP1-204ENST00000517691 MAGED1Q9Y5V3 778 aaPredicted RBP3.05□□□□□ -1.92
SKP1-204ENST00000517691 PRAMEF27A3QJZ7 478 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CTAGE5O15320 804 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 MSH4O15457 936 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CHMP2AO43633 222 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 GAS7O60861 476 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 PRKD3O94806 890 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 GFPT2O94808 682 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 BAG4O95429 457 aaKnown RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 CD4P01730 458 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 SLFN14P0C7P3 912 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 KCNA2P16389 499 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 SYN1P17600 705 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 PDCP20941 246 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 MARK3P27448 753 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CST5P28325 142 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 HOXC13P31276 330 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CIITAP33076 1130 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 MCM7P33993 719 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CD68P34810 354 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 TCF7P36402 384 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 RTP1P59025 263 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 ACTR2P61160 394 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 GRB10Q13322 594 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 ITGB3BPQ13352 177 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 CUL4AQ13619 759 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 ITGA7Q13683 1181 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 NCAPHQ15003 741 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms