RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 KCNB1Q14721 858 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 NOLC1Q14978 699 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PPA1Q15181 289 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 E2F5Q15329 346 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SEC23BQ15437 767 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 C5orf22Q49AR2 442 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC44A4Q53GD3 710 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 KRTCAP3Q53RY4 240 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLFN12LQ6IEE8 588 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 RAB12Q6IQ22 244 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 IYDQ6PHW0 289 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ABRAXAS1Q6UWZ7 409 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 C20orf204Q6ZNR8 217 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 IKBIPQ70UQ0 350 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 KANSL1Q7Z3B3 1105 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC9B2Q86UD5 537 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MICU3Q86XE3 530 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CCAR2Q8N163 923 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF619Q8N2I2 560 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MPP5Q8N3R9 675 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCSK9Q8NBP7 692 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 C2CD4AQ8NCU7 369 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 GPR156Q8NFN8 814 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MOSPD2Q8NHP6 518 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CPT1CQ8TCG5 803 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 UTP15Q8TED0 518 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TNPO1Q92973 898 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 KIF1BPQ96EK5 621 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF764Q96H86 408 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TMX3Q96JJ7 454 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TRIM47Q96LD4 638 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PI4K2AQ9BTU6 479 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 HGH1Q9BTY7 390 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 METTL22Q9BUU2 404 aaPredicted RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ACAT2Q9BWD1 397 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 FOXP3Q9BZS1 431 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF518BQ9C0D4 1074 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TWSG1Q9GZX9 223 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PCDHAC1Q9H158 963 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 MRPL46Q9H2W6 279 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 NDST4Q9H3R1 872 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SUGCTQ9HAC7 445 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TRMT1Q9NXH9 659 aaKnown RBP4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 CALCOCO1Q9P1Z2 691 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 POGKQ9P215 609 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TBC1D14Q9P2M4 693 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 SH3BGRL2Q9UJC5 107 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 HSF4Q9ULV5 492 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 DERAQ9Y315 318 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 TELO2Q9Y4R8 837 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 IKBKGQ9Y6K9 419 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 X6R8D5 127 aa4.33□□□□□ -1.72
RNU4-60P-201ENST00000517239 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TMEM233B4DJY2 109 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TAF4O00268 1085 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 KLK10O43240 276 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TBX10O75333 385 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 RASSF9O75901 435 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 WFS1O76024 890 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 WISP1O95388 367 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRLP01236 227 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TUBB4AP04350 444 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 CNPP09543 421 aaKnown RBP4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 SRGAP2BP0DMP2 458 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 LAMP2P13473 410 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 IL1R1P14778 569 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 NFKBIAP25963 317 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 GCH1P30793 250 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 RGS3P49796 1198 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ALDH3A2P51648 485 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 LIMK1P53667 647 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 MLLT6P55198 1093 aaPredicted RBP4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ROM1Q03395 351 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 EXOSC9Q06265 439 aaKnown RBP4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 EPS8Q12929 822 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 RAB39AQ14964 217 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TBCCQ15814 346 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 CHRNA2Q15822 529 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 MAPKAPK3Q16644 382 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 PRAMEF14Q5SWL7 426 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 SFRP5Q5T4F7 317 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 RAP1GAP2Q684P5 730 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 MFSD5Q6N075 450 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 DCLRE1AQ6PJP8 1040 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 CRTC1Q6UUV9 634 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 SYT13Q7L8C5 426 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZNF804AQ7Z570 1209 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ANKS1BQ7Z6G8 1248 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 FAM129CQ86XR2 697 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 ADSSL1Q8N142 457 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 TOP6BLQ8N6T0 577 aa4.32□□□□□ -1.72
RNU4-60P-201ENST00000517239 DCBLD1Q8N8Z6 715 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms