RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 BIN1O00499 593 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SOX1O00570 391 aaPredicted RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 OFD1O75665 1012 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KIF20AO95235 890 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GHRHP01286 108 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CA3P07451 260 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MCF2P10911 925 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HTRA4P83105 476 aaPredicted RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SMAD3P84022 425 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CTBSQ01459 385 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RNASELQ05823 741 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SERINC3Q13530 473 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KCNB1Q14721 858 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NOLC1Q14978 699 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLLU1OSQ5K130 101 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SLFN12LQ6IEE8 588 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GLB1LQ6UWU2 654 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MAP4K3Q8IVH8 894 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SMYD4Q8IYR2 804 aaPredicted RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GPT2Q8TD30 523 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 POMGNT1Q8WZA1 660 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KCNN1Q92952 543 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TIFAQ96CG3 184 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HVCN1Q96D96 273 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CASD1Q96PB1 797 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GSDMAQ96QA5 445 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 POP1Q99575 1024 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CCDC94Q9BW85 323 aaPredicted RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 STRA6Q9BX79 667 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TMEM117Q9H0C3 514 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CDT1Q9H211 546 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NXF3Q9H4D5 531 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PCIF1Q9H4Z3 704 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RSAD1Q9HA92 442 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 UBN1Q9NPG3 1134 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 AAASQ9NRG9 546 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TYW1Q9NV66 732 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MIOSQ9NXC5 875 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 DACH1Q9UI36 760 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 YBX2Q9Y2T7 364 aaKnown RBP6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GIT1Q9Y2X7 761 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LTBP2Q14767 1821 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ARID2Q68CP9 1835 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 A0A0B4J269 797 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LINC01553A4QN01 128 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GOLGA8IPA6NC78 632 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GOLGA8JA6NMD2 632 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLIC2O15247 247 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EIF3DO15371 548 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KLF4O43474 513 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CALUO43852 315 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RECQL4O94761 1208 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MBD3O95983 291 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 POMCP01189 267 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PIGRP01833 764 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ALDH2P05091 517 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ATF7P17544 494 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PROZP22891 400 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HOXD13P35453 343 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MLH1P40692 756 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ACOT2P49753 483 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 AFF1P51825 1210 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MCL1Q07820 350 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KNOP1Q1ED39 458 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NOMO2Q5JPE7 1267 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF658Q5TYW1 1059 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CEP135Q66GS9 1140 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ARMCX5Q6P1M9 558 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SLC39A4Q6P5W5 647 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 LRRC55Q6ZSA7 311 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SLITRK4Q8IW52 837 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TMEM192Q8IY95 271 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CMTR2Q8IYT2 770 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KIAA0895Q8NCT3 520 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 URGCPQ8TCY9 931 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ARNTL2Q8WYA1 636 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF689Q96CS4 500 aaPredicted RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ANAPC16Q96DE5 110 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RPS6KC1Q96S38 1066 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CBWD1Q9BRT8 395 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SRRTQ9BXP5 876 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HAPLN2Q9GZV7 340 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GBP3Q9H0R5 595 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NUP62CLQ9H1M0 184 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CLSTN2Q9H4D0 955 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RPF1Q9H9Y2 349 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 DNAJB12Q9NXW2 375 aaKnown RBP6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SIRPGQ9P1W8 387 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MAN1B1Q9UKM7 699 aa6.3□□□□□ -1.4
SCARNA6.1-201ENST00000516989 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms