RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 WDR35Q9P2L0 1181 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 DRG1Q9Y295 367 aaKnown RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 EFR3BQ9Y2G0 817 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 DCDC2CA8MYV0 355 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 MAGEB2O15479 319 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 PEX10O60683 326 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 PGK2P07205 417 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 TXNP10599 105 aaKnown RBP15.72■□□□□ 0.11
NUP54-217ENST00000514987 CD58P19256 250 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 AUHQ13825 339 aaKnown RBP15.72■□□□□ 0.11
NUP54-217ENST00000514987 C2CD6Q53TS8 623 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 PPP1R15BQ5SWA1 713 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 GPAT2Q6NUI2 795 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 EFCAB12Q6NXP0 572 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 LLGL2Q6P1M3 1020 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
NUP54-217ENST00000514987 P3H4Q92791 437 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 CHMP6Q96FZ7 201 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 CCDC77Q9BR77 488 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 HEMGNQ9BXL5 484 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
NUP54-217ENST00000514987 XYLT2Q9H1B5 865 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 CCDC134Q9H6E4 229 aa15.72■□□□□ 0.11
NUP54-217ENST00000514987 R3HDM2Q9Y2K5 976 aaKnown RBP15.72■□□□□ 0.11
NUP54-217ENST00000514987 TP73O15350 636 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 KRT1P04264 644 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 MCF2P10911 925 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 P4HA1P13674 534 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 BRD2P25440 801 aaKnown RBP15.71■□□□□ 0.11
NUP54-217ENST00000514987 ATICP31939 592 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 ASPAP45381 313 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 LACTBP83111 547 aaPredicted RBP15.71■□□□□ 0.11
NUP54-217ENST00000514987 LAMC2Q13753 1193 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 ZNF667Q5HYK9 610 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 GKAP1Q5VSY0 366 aaPredicted RBP15.71■□□□□ 0.11
NUP54-217ENST00000514987 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
NUP54-217ENST00000514987 NLRP4Q96MN2 994 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 SLITRK1Q96PX8 696 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 HERPUD2Q9BSE4 406 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
NUP54-217ENST00000514987 LIASO43766 372 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 GSCP56915 257 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 MBTD1Q05BQ5 628 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 TTLL12Q14166 644 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 ZFYVE27Q5T4F4 411 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 SPOCD1Q6ZMY3 1216 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 GSTA5Q7RTV2 222 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CPLX4Q7Z7G2 160 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 TRIM50Q86XT4 487 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CACNA2D3Q8IZS8 1091 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 TTC39CQ8N584 583 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 EPS8L3Q8TE67 593 aaKnown RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 FNIP1Q8TF40 1166 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CDCA5Q96FF9 252 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CLMNQ96JQ2 1002 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 MCEEQ96PE7 176 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 SELENOSQ9BQE4 189 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 BCO2Q9BYV7 579 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CDT1Q9H211 546 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CYP3A43Q9HB55 503 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 TXNRD2Q9NNW7 524 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 INTS9Q9NV88 658 aaKnown RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 PNMA3Q9UL41 463 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 COL1A2P08123 1366 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 SIGLEC16A6NMB1 481 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 KRT7P08729 469 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 CHN1P15882 459 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 KLRC2P26717 231 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 RPL7AP62424 266 aaKnown RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 ACAP1Q15027 740 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 KCTD19Q17RG1 926 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 IZUMO3Q5VZ72 239 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 C6orf89Q6UWU4 347 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 FBXO16Q8IX29 292 aaPredicted RBP15.7■□□□□ 0.1
NUP54-217ENST00000514987 ASB7Q9H672 318 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 VRTNQ9H8Y1 702 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 LRRC4CQ9HCJ2 640 aa15.7■□□□□ 0.1
NUP54-217ENST00000514987 SMIM23A6NLE4 172 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 ZSWIM8A7E2V4 1837 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 C22orf31O95567 290 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 ABHD2P08910 425 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 WEE2P0C1S8 567 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 ANK1P16157 1881 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 DRD4P21917 467 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 SSTR3P32745 418 aaPredicted RBP15.69■□□□□ 0.1
NUP54-217ENST00000514987 RDXP35241 583 aaKnown RBP15.69■□□□□ 0.1
NUP54-217ENST00000514987 GJC1P36383 396 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 CCNA1P78396 465 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 IFI35P80217 286 aaPredicted RBP15.69■□□□□ 0.1
NUP54-217ENST00000514987 MOGSQ13724 837 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 STAT4Q14765 748 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 LLGL1Q15334 1064 aa15.69■□□□□ 0.1
NUP54-217ENST00000514987 HADHQ16836 314 aaKnown RBP15.69■□□□□ 0.1
NUP54-217ENST00000514987 Q3C1V9 767 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms