RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 FIZ1Q96SL8 496 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 IKZF4Q9H2S9 585 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 EHMT1Q9H9B1 1298 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 POLD4Q9HCU8 107 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TBCCD1Q9NVR7 557 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 AIPL1Q9NZN9 384 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 WRAP73Q9P2S5 460 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 AJAP1Q9UKB5 411 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 DNM3Q9UQ16 869 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 RLFQ13129 1914 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 E7EVH7 732 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 AKAP3O75969 853 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SLITRK3O94933 977 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 EYA4O95677 639 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SERPING1P05155 500 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 KRT4P19013 534 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 EVI2BP34910 448 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SERPINB6P35237 376 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CKAP4Q07065 602 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CETN1Q12798 172 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC15A2Q16348 729 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 KLHDC7AQ5VTJ3 777 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PPP4R4Q6NUP7 873 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 NFRKBQ6P4R8 1299 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 B3GNT9Q6UX72 402 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PRR23CQ6ZRP0 262 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 RFPL4BQ6ZWI9 263 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CACNA2D4Q7Z3S7 1137 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 ALDH16A1Q8IZ83 802 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 LSMEM2Q8N112 164 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM151AQ8WW52 585 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 STARD8Q92502 1023 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC5A5Q92911 643 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PEX13Q92968 403 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TLR10Q9BXR5 811 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 GLIS2Q9BZE0 524 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 RNF39Q9H2S5 420 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SERHL2Q9H4I8 314 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SIX2Q9NPC8 291 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 BTBD7Q9P203 1132 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PDXKO00764 312 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ZBTB39O15060 712 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 TGFB1I1O43294 461 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 NCK2O43639 380 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ACTN1P12814 892 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC9A1P19634 815 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 MAGEA1P43355 309 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 HAAOP46952 286 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SEC24CP53992 1094 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 MAP3K7CLP57077 242 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PPARDQ03181 441 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PPP2R5CQ13362 524 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 LACTB2Q53H82 288 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FRMD5Q7Z6J6 570 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM186BQ8IYM0 893 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 OLIG1Q8TAK6 271 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 EPS8L3Q8TE67 593 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CYFIP2Q96F07 1278 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 RBM14Q96PK6 669 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 HPS4Q9NQG7 708 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 OLFML3Q9NRN5 406 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 A0A087X0T9 212 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FOXN3O00409 490 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM107AO95990 144 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM228BP0C875 321 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 COL6A2P12110 1019 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ETS2P15036 469 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ATP6V1C1P21283 382 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CD9P21926 228 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 TMOD1P28289 359 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SERPINB3P29508 390 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 WEE1P30291 646 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CASP4P49662 377 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 NIPAL4Q0D2K0 466 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SP140Q13342 867 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CTTNQ14247 550 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC18A3Q16572 532 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 TRIM71Q2Q1W2 868 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC9C1Q4G0N8 1177 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 C1orf186Q6ZWK4 172 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 IRF2BP2Q7Z5L9 587 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 TREML1Q86YW5 311 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SUPT20HQ8NEM7 779 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CDC26Q8NHZ8 85 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FBF1Q8TES7 1133 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 P3H4Q92791 437 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 AZIN2Q96A70 460 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ANKRD36BP1Q96IX9 119 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 NENFQ9UMX5 172 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 DOCK5Q9H7D0 1870 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms