RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 TMC8Q8IU68 726 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 ATAD1Q8NBU5 361 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 LRRC3Q9BY71 257 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 TBC1D17Q9HA65 648 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 RBAKQ9NYW8 714 aaPredicted RBP12.99□□□□□ -0.33
CDK7-208ENST00000512687 MYH10P35580 1976 aa12.99□□□□□ -0.33
CDK7-208ENST00000512687 VPS13AQ96RL7 3174 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 H0Y858 1186 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 CYB561D2O14569 222 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 EXTL3O43909 919 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 ITGB3P05106 788 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 ME1P48163 572 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 EPHA5P54756 1037 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 TFAMQ00059 246 aaKnown RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 FAM26FQ5R3K3 315 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 TANGO2Q6ICL3 276 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 PDZD4Q76G19 769 aaPredicted RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 ZSWIM3Q96MP5 696 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 ZNF334Q9HCZ1 680 aaPredicted RBP12.98□□□□□ -0.33
CDK7-208ENST00000512687 ARHGEF3Q9NR81 526 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
CDK7-208ENST00000512687 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
CDK7-208ENST00000512687 EIF3DO15371 548 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDK7-208ENST00000512687 TGFB1I1O43294 461 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
CDK7-208ENST00000512687 MYL4P12829 197 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 PDIA4P13667 645 aaKnown RBP12.97□□□□□ -0.33
CDK7-208ENST00000512687 AFMP43652 599 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 CUL4BQ13620 913 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 SV2CQ496J9 727 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 SLC39A12Q504Y0 691 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 FAM78AQ5JUQ0 283 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 UNC13DQ70J99 1090 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 LRRTM3Q86VH5 581 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 CBWD2Q8IUF1 395 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ELMOD1Q8N336 334 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 SHKBP1Q8TBC3 707 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 FOXQ1Q9C009 403 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 LRRC27Q9C0I9 530 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 L1RE1Q9UN81 338 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
CDK7-208ENST00000512687 ACTN4O43707 911 aaKnown RBP12.96□□□□□ -0.33
CDK7-208ENST00000512687 KLRC4O43908 158 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 LRRN2O75325 713 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 ECI2O75521 394 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 MICAL2O94851 1124 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 ATF6P18850 670 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 PAX3P23760 479 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 AMPD3Q01432 767 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 BFSP1Q12934 665 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 TEAD2Q15562 447 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 CCDC142Q17RM4 750 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 STXBP5Q5T5C0 1151 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 NELFCDQ8IXH7 590 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 PDCL2Q8N4E4 241 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 ZNF512Q96ME7 567 aaPredicted RBP12.96□□□□□ -0.33
CDK7-208ENST00000512687 ASB16Q96NS5 453 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 DLGAP2Q9P1A6 1054 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 KIAA1549LQ6ZVL6 1849 aa12.96□□□□□ -0.33
CDK7-208ENST00000512687 UBE4BO95155 1302 aa12.95□□□□□ -0.34
CDK7-208ENST00000512687 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
CDK7-208ENST00000512687 ZNF197O14709 1029 aa12.95□□□□□ -0.34
CDK7-208ENST00000512687 CLIC2O15247 247 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms