RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 CREB3L3Q68CJ9 461 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 MINDY1Q8N5J2 469 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PIP4K2CQ8TBX8 421 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 CCDC12Q8WUD4 166 aaPredicted RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 CNOT6LQ96LI5 555 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 UROC1Q96N76 676 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PGLYRP2Q96PD5 576 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 SLC46A2Q9BY10 475 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 HELZP42694 1942 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 A0A087WWV3 80 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 SMIM28A0A1B0GU29 152 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 LRRIQ4A6NIV6 560 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.81
NUP54-211ENST00000512151 GJB3O75712 270 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 CPB1P15086 417 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 ITPKBP27987 946 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 GABRR2P28476 465 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 GJA4P35212 333 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 P2RY2P41231 377 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 DUSP4Q13115 394 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PTPAQ15257 358 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 EPHA7Q15375 998 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 MAPK6Q16659 721 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 FAM187BQ17R55 369 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 FBXO43Q4G163 708 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 CDCA2Q69YH5 1023 aaPredicted RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 PCSK4Q6UW60 755 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 LPCAT2Q7L5N7 544 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 OTUD6AQ7L8S5 288 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 DNAJB7Q7Z6W7 309 aaPredicted RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 BICD2Q8TD16 824 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 ACDQ96AP0 544 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 ZMAT2Q96NC0 199 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 PRORYQ9H606 182 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 TASP1Q9H6P5 420 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 IL21Q9HBE4 155 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PRMT7Q9NVM4 692 aaPredicted RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 THG1LQ9NWX6 298 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 DDX25Q9UHL0 483 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 MAFFQ9ULX9 164 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 SLC27A5Q9Y2P5 690 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
NUP54-211ENST00000512151 EPHB3P54753 998 aa10□□□□□ -0.81
NUP54-211ENST00000512151 PSMD2Q13200 908 aa10□□□□□ -0.81
NUP54-211ENST00000512151 LYSMD4Q5XG99 296 aa10□□□□□ -0.81
NUP54-211ENST00000512151 ZNF280DQ6N043 979 aa10□□□□□ -0.81
NUP54-211ENST00000512151 TMEM92Q6UXU6 159 aa10□□□□□ -0.81
NUP54-211ENST00000512151 TTC30AQ86WT1 665 aa10□□□□□ -0.81
NUP54-211ENST00000512151 DEFB119Q8N690 84 aa10□□□□□ -0.81
NUP54-211ENST00000512151 CEP120Q8N960 986 aa10□□□□□ -0.81
NUP54-211ENST00000512151 USP33Q8TEY7 942 aa10□□□□□ -0.81
NUP54-211ENST00000512151 BSNDQ8WZ55 320 aa10□□□□□ -0.81
NUP54-211ENST00000512151 DDX12PQ92771 950 aa10□□□□□ -0.81
NUP54-211ENST00000512151 HAS1Q92839 578 aa10□□□□□ -0.81
NUP54-211ENST00000512151 USP13Q92995 863 aaPredicted RBP10□□□□□ -0.81
NUP54-211ENST00000512151 C18orf25Q96B23 403 aaPredicted RBP10□□□□□ -0.81
NUP54-211ENST00000512151 SUSD3Q96L08 255 aa10□□□□□ -0.81
NUP54-211ENST00000512151 PRIMPOLQ96LW4 560 aa10□□□□□ -0.81
NUP54-211ENST00000512151 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
NUP54-211ENST00000512151 DNAAF2Q9NVR5 837 aaKnown RBP10□□□□□ -0.81
NUP54-211ENST00000512151 SLC6A14Q9UN76 642 aa10□□□□□ -0.81
NUP54-211ENST00000512151 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 TRABD2BA6NFA1 517 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 M0R2N6 131 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CBFA2T3O75081 653 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 SLITRK3O94933 977 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 SERPINF2P08697 491 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CHRM1P11229 460 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 ABCG1P45844 678 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CDR1P51861 262 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 ATXN3P54252 364 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 SEC13P55735 322 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 GFPT1Q06210 699 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 SRSF1Q07955 248 aaKnown RBP eCLIP9.99□□□□□ -0.817e-7■□□□□ 8.2
NUP54-211ENST00000512151 PRPF4BQ13523 1007 aaKnown RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 CAMK2BQ13554 666 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 HNRNPDQ14103 355 aaKnown RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 NPY5RQ15761 445 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 ARHGAP15Q53QZ3 475 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 XKR4Q5GH76 650 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 NCAPH2Q6IBW4 605 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 ALKAL1Q6UXT8 129 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 MAEAQ7L5Y9 396 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 TMPRSS7Q7RTY8 843 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 TPH2Q8IWU9 490 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CCDC33Q8N5R6 958 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 ATAD1Q8NBU5 361 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CD101Q93033 1021 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 PSMG2Q969U7 264 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms