RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MCRS1Q96EZ8 462 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 KCTD10Q9H3F6 313 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 MAPK8IP1Q9UQF2 711 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 COL4A3Q01955 1670 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 EXOC3O60645 756 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 TNNC2P02585 160 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 GJA1P17302 382 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 PAX3P23760 479 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 PNPLA4P41247 253 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 VCPP55072 806 aaKnown RBP17.75■□□□□ 0.43
DDX41-213ENST00000512027 PSMD2Q13200 908 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 PRSS36Q5K4E3 855 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 OSTM1Q86WC4 334 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 WDR49Q8IV35 697 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 C12orf56Q8IXR9 622 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 PDCL2Q8N4E4 241 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 SLC44A3Q8N4M1 653 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 LRRC52Q8N7C0 313 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 CGRRF1Q99675 332 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 OXCT2Q9BYC2 517 aaPredicted RBP17.75■□□□□ 0.43
DDX41-213ENST00000512027 ZCWPW1Q9H0M4 648 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 DNAJC25Q9H1X3 360 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 KIAA1586Q9HCI6 787 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 TMLHEQ9NVH6 421 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 IGSF9Q9P2J2 1179 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 DSEQ9UL01 958 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 DUSP12Q9UNI6 340 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 HCN4Q9Y3Q4 1203 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 SNX9Q9Y5X1 595 aa17.75■□□□□ 0.43
DDX41-213ENST00000512027 ANHXE9PGG2 379 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 MYL1P05976 194 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 CFHP08603 1231 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 MYL4P12829 197 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 TNNI1P19237 187 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
DDX41-213ENST00000512027 RBP5P82980 135 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 PNOCQ13519 176 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 PSMD6Q15008 389 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 SURF1Q15526 300 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 DUOXA2Q1HG44 320 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 TRAPPC11Q7Z392 1133 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 BMP8AQ7Z5Y6 402 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 FBXL6Q8N531 539 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 ZNF516Q92618 1163 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 ERCC4Q92889 916 aaPredicted RBP17.74■□□□□ 0.43
DDX41-213ENST00000512027 KXD1Q9BQD3 176 aa17.74■□□□□ 0.43
DDX41-213ENST00000512027 HUS1O60921 280 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 MOSPD3O75425 235 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 RHOBTB3O94955 611 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 CST3P01034 146 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 SNRPFP62306 86 aaKnown RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 PDZD4Q76G19 769 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 SMYD4Q8IYR2 804 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 FMR1NBQ8N0W7 255 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 THEM5Q8N1Q8 247 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 ELMOD1Q8N336 334 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 STKLD1Q8NE28 680 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 ELMO3Q96BJ8 720 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 HPDLQ96IR7 371 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 MFSD14AQ96MC6 490 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 ZNF512Q96ME7 567 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 FNBP1Q96RU3 617 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 SEPT5Q99719 369 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 LPIN3Q9BQK8 851 aa17.73■□□□□ 0.43
DDX41-213ENST00000512027 ABI2Q9NYB9 513 aaPredicted RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
DDX41-213ENST00000512027 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 NR3C1P04150 777 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 SOWAHAQ2M3V2 549 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 IER5LQ5T953 404 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 IQCEQ6IPM2 695 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
DDX41-213ENST00000512027 ADGRF2Q8IZF7 708 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 ENGASEQ8NFI3 743 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 ZNF334Q9HCZ1 680 aaPredicted RBP17.72■□□□□ 0.43
DDX41-213ENST00000512027 ASAH2Q9NR71 780 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 DMAC2Q9NW81 257 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 GDAP2Q9NXN4 497 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 DDX43Q9NXZ2 648 aaKnown RBP17.72■□□□□ 0.43
DDX41-213ENST00000512027 FBXL21Q9UKT6 434 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 MAFFQ9ULX9 164 aa17.72■□□□□ 0.43
DDX41-213ENST00000512027 LRRIQ3A6PVS8 624 aaPredicted RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 PDXKO00764 312 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 ATF6P18850 670 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 ALDH1A3P47895 512 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 EPHB3P54753 998 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 DLG4P78352 724 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 MYO1EQ12965 1108 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 MGAT5BQ3V5L5 792 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 TMC8Q8IU68 726 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 SIX5Q8N196 739 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 GOLGA5Q8TBA6 731 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 GPR152Q8TDT2 470 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 KBTBD7Q8WVZ9 684 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
DDX41-213ENST00000512027 ZSWIM3Q96MP5 696 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 PI4K2AQ9BTU6 479 aa17.71■□□□□ 0.43
DDX41-213ENST00000512027 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms