RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PTPRDP23468 1912 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 ZNF638Q14966 1978 aaKnown RBP14.32□□□□□ -0.12
RNF4-215ENST00000511843 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 ZNF202O95125 648 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 TNNC2P02585 160 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 MYL4P12829 197 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
RNF4-215ENST00000511843 CASP4P49662 377 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 CYP24A1Q07973 514 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 DPYDQ12882 1025 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 MYBPC2Q14324 1141 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 CCDC142Q17RM4 750 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 CENPPQ6IPU0 288 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 RTL10Q7L3V2 364 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 METTL23Q86XA0 190 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
RNF4-215ENST00000511843 PDCL2Q8N4E4 241 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 PLEKHO2Q8TD55 490 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 ZCWPW1Q9H0M4 648 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
RNF4-215ENST00000511843 DNAJC25Q9H1X3 360 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 TMLHEQ9NVH6 421 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 DSEQ9UL01 958 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 MAPK8IP1Q9UQF2 711 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 GREB1Q4ZG55 1949 aa14.31□□□□□ -0.12
RNF4-215ENST00000511843 NUP210Q8TEM1 1887 aaPredicted RBP14.3□□□□□ -0.12
RNF4-215ENST00000511843 TNNI1P19237 187 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 PAX3P23760 479 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 PNPLA4P41247 253 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 NUCB2P80303 420 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 RBP5P82980 135 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 PSMD6Q15008 389 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 PRSS36Q5K4E3 855 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 OSTM1Q86WC4 334 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 WDR49Q8IV35 697 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 LRRC52Q8N7C0 313 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 STKLD1Q8NE28 680 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 ZNF516Q92618 1163 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 ELMO3Q96BJ8 720 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 ZNF512Q96ME7 567 aaPredicted RBP14.3□□□□□ -0.12
RNF4-215ENST00000511843 SEPT5Q99719 369 aaPredicted RBP14.3□□□□□ -0.12
RNF4-215ENST00000511843 LPIN3Q9BQK8 851 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
RNF4-215ENST00000511843 KCTD10Q9H3F6 313 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 KIAA1586Q9HCI6 787 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 FBXL21Q9UKT6 434 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 CA14Q9ULX7 337 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 SNX9Q9Y5X1 595 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 MIA3Q5JRA6 1907 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 TICRRQ7Z2Z1 1910 aa14.3□□□□□ -0.12
RNF4-215ENST00000511843 EXOC3O60645 756 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 HUS1O60921 280 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 MOSPD3O75425 235 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 SURF1Q15526 300 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 MGAT5BQ3V5L5 792 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 IQCEQ6IPM2 695 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 PDZD4Q76G19 769 aaPredicted RBP14.29□□□□□ -0.12
RNF4-215ENST00000511843 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 C12orf56Q8IXR9 622 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 SIX5Q8N196 739 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 THEM5Q8N1Q8 247 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 ELMOD1Q8N336 334 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 FLCNQ8NFG4 579 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 GPR152Q8TDT2 470 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
RNF4-215ENST00000511843 HPDLQ96IR7 371 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 ZSWIM3Q96MP5 696 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
RNF4-215ENST00000511843 ZNF334Q9HCZ1 680 aaPredicted RBP14.29□□□□□ -0.12
RNF4-215ENST00000511843 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
RNF4-215ENST00000511843 KIF26AQ9ULI4 1882 aaPredicted RBP14.29□□□□□ -0.12
RNF4-215ENST00000511843 KRBA1A5PL33 1030 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 SRFP11831 508 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 ATF6P18850 670 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 AVPR2P30518 371 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 GPR15P49685 360 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 EPHB3P54753 998 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 PSMD2Q13200 908 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 PNOCQ13519 176 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 TEAD2Q15562 447 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 SOWAHAQ2M3V2 549 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 CYP4A22Q5TCH4 519 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 TMC8Q8IU68 726 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 GPIHBP1Q8IV16 184 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
RNF4-215ENST00000511843 PRSS33Q8NF86 280 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 GIPC2Q8TF65 315 aa14.28□□□□□ -0.12
RNF4-215ENST00000511843 LRRC3Q9BY71 257 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms