RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LPIN3Q9BQK8 851 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 FREM2Q5SZK8 3169 aa20.74■□□□□ 0.91
HMGCS1-206ENST00000511774 PPEF2O14830 753 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 JAK2O60674 1132 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 MARCKSP29966 332 aaPredicted RBP20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 PLD1Q13393 1074 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 TRIM68Q6AZZ1 485 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 WASF1Q92558 559 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 FAM83CQ9BQN1 747 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 HAPLN2Q9GZV7 340 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 GKN1Q9NS71 199 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 SLC8A2Q9UPR5 921 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 THADAQ6YHU6 1953 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 GON4LQ3T8J9 2241 aa20.73■□□□□ 0.91
HMGCS1-206ENST00000511774 PCNX2A6NKB5 2137 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 LNP1A1A4G5 178 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 RNF40O75150 1001 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 AKAP3O75969 853 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 CXCL8P10145 99 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 U2AF2P26368 475 aaKnown RBP eCLIP20.72■□□□□ 0.911e-12■■□□□ 12.4
HMGCS1-206ENST00000511774 ALDH1A3P47895 512 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 ACAP1Q15027 740 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 ZNF174Q15697 407 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 HAUS6Q7Z4H7 955 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 NSUN7Q8NE18 718 aaKnown RBP20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 EZH1Q92800 747 aaPredicted RBP20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 TCHPQ9BT92 498 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 SLC46A2Q9BY10 475 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 ADAM33Q9BZ11 813 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 CCL26Q9Y258 94 aa20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 SMG1Q96Q15 3661 aaKnown RBP20.72■□□□□ 0.91
HMGCS1-206ENST00000511774 GCN1Q92616 2671 aaKnown RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 BCLAF3A2AJT9 711 aaKnown RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 SRRM3A6NNA2 597 aaPredicted RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 TRDMT1O14717 391 aaKnown RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 HIP1RO75146 1068 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 OR52Z1P0C646 297 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 WEE1P30291 646 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 LRPAP1P30533 357 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 CCT6AP40227 531 aaKnown RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 MCM2P49736 904 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 PLCB2Q00722 1185 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 ZBTB6Q15916 424 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 SH3PXD2AQ5TCZ1 1133 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 RUSC1Q9BVN2 902 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 EBF3Q9H4W6 596 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 TASP1Q9H6P5 420 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 KIAA1024Q9UPX6 916 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 ASB3Q9Y575 518 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 MYH11P35749 1972 aa20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 SETXQ7Z333 2677 aaKnown RBP20.71■□□□□ 0.91
HMGCS1-206ENST00000511774 SCN1AP35498 2009 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 OR6C75A6NL08 312 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 SLC16A4O15374 487 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 EPB41L2O43491 1005 aaKnown RBP20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 ARSAP15289 507 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 ATF6P18850 670 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 CREB5Q02930 508 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 ME3Q16798 604 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 TMEM150AQ86TG1 271 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 OR10T2Q8NGX3 314 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 ERMNQ8TAM6 284 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 ANKFY1Q9P2R3 1169 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 PTPRDP23468 1912 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 LOC400499M0QZD8 3231 aa20.7■□□□□ 0.9
HMGCS1-206ENST00000511774 SFI1A8K8P3 1242 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 PATE3B3GLJ2 98 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 E9PMD0 336 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 CDX4O14627 284 aaPredicted RBP20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 CAVIN2O95810 425 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 MUTP22033 750 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 GUCY1B3Q02153 619 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 GRSF1Q12849 480 aaKnown RBP eCLIP20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 RUNX3Q13761 415 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 NOLC1Q14978 699 aaKnown RBP eCLIP20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 CAMKK1Q8N5S9 505 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 SCNM1Q9BWG6 230 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 KMT5AQ9NQR1 393 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 DDX19AQ9NUU7 478 aaKnown RBP20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 INVSQ9Y283 1065 aa20.69■□□□□ 0.9
HMGCS1-206ENST00000511774 IGSF10Q6WRI0 2623 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 TTC26A0AVF1 554 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 ANTXRLA6NF34 631 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 TNFSF9P41273 254 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 GALK1P51570 392 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 ST3GAL1Q11201 340 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 MYBPC2Q14324 1141 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 ARHGAP15Q53QZ3 475 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 OVOS1Q6IE37 1185 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 KCNK18Q7Z418 384 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 C4orf32Q8N8J7 132 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 GTF3C6Q969F1 213 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 PI4KAP42356 2102 aa20.68■□□□□ 0.9
HMGCS1-206ENST00000511774 ATG13O75143 517 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 TOM1L1O75674 476 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 NMT1P30419 496 aaKnown RBP20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 RING1Q06587 406 aa20.67■□□□□ 0.9
HMGCS1-206ENST00000511774 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms