RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CGRRF1Q99675 332 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 CEP72Q9P209 647 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 IGSF9Q9P2J2 1179 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 MAPK8IP1Q9UQF2 711 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 INSL5Q9Y5Q6 135 aa17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 ZFP37Q9Y6Q3 630 aaPredicted RBP17.37■□□□□ 0.37
PDLIM5-216ENST00000511767 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 KIF20AO95235 890 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 NR3C1P04150 777 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 CASP4P49662 377 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 SIGLEC14Q08ET2 396 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 SOWAHAQ2M3V2 549 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 PABPC1LQ4VXU2 614 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 DPH6Q7L8W6 267 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 UBALD2Q8IYN6 164 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 SLC44A3Q8N4M1 653 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 RSAD2Q8WXG1 361 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 FGF13Q92913 245 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 NXPE3Q969Y0 559 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 CCDC34Q96HJ3 373 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 ZNF512Q96ME7 567 aaPredicted RBP17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 SMOC2Q9H3U7 446 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 HSFX1Q9UBD0 423 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 CDH7Q9ULB5 785 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 PCDHA5Q9Y5H7 936 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 SNX9Q9Y5X1 595 aa17.36■□□□□ 0.37
PDLIM5-216ENST00000511767 MTMR11A4FU01 709 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 ANHXE9PGG2 379 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 GABRDO14764 452 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 HUS1O60921 280 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 C4BPAP04003 597 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 RHOP08100 348 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 TWF1Q12792 350 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 BFSP1Q12934 665 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 TDGQ13569 410 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 NFIL3Q16649 462 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 TOP6BLQ8N6T0 577 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 ASIC4Q96FT7 647 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 R3HCC1Q9Y3T6 440 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-216ENST00000511767 TMEM221A6NGB7 291 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 M0R296 226 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 CALUO43852 315 aaPredicted RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 MICAL2O94851 1124 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 FAM163BP0C2L3 166 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 MCCD1P59942 119 aaPredicted RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 PRSS36Q5K4E3 855 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 HFE2Q6ZVN8 426 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 GET4Q7L5D6 327 aaPredicted RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 HS6ST3Q8IZP7 471 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 TMEM86AQ8N2M4 240 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 SPATA18Q8TC71 538 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 ERCC4Q92889 916 aaPredicted RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 CORO1BQ9BR76 489 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 RPP25Q9BUL9 199 aaKnown RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 TMLHEQ9NVH6 421 aa17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 MRPS23Q9Y3D9 190 aaKnown RBP17.34■□□□□ 0.37
PDLIM5-216ENST00000511767 DENND4AQ7Z401 1863 aa17.33■□□□□ 0.37
PDLIM5-216ENST00000511767 MAPK13O15264 365 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 MOSPD3O75425 235 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 COL9A1P20849 921 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 CCR2P41597 374 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 PRCPP42785 496 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 LHX1P48742 406 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 TUFMP49411 452 aaKnown RBP17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 CDR1P51861 262 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 EPHA5P54756 1037 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 DLG4P78352 724 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 SMARCB1Q12824 385 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 ADAM9Q13443 819 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 MTMR3Q13615 1198 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 SLC39A12Q504Y0 691 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 C1orf220Q5T0J3 134 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 IQCEQ6IPM2 695 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 DNAJB7Q7Z6W7 309 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 DCP1BQ8IZD4 617 aaKnown RBP17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 TMC2Q8TDI7 906 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 TCEAL4Q96EI5 215 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
PDLIM5-216ENST00000511767 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 ZNF197O14709 1029 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 IKBKBO14920 756 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 SMC2O95347 1197 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 LMO2P25791 158 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 ALDH1A3P47895 512 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 AP3M2P53677 418 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 MYL6P60660 151 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 HTR4Q13639 388 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 ZCWPW2Q504Y3 356 aa17.32■□□□□ 0.36
PDLIM5-216ENST00000511767 CYP4A22Q5TCH4 519 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms