RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MAN1C1Q9NR34 630 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 SSX2IPQ9Y2D8 614 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 DMDP11532 3685 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDPN-209ENST00000510906 SMIM28A0A1B0GU29 152 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 SOBPA7XYQ1 873 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 SLC26A4O43511 780 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 GLUD1P00367 558 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 MCF2P10911 925 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 CEBPZQ03701 1054 aaKnown RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 SOX4Q06945 474 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 STRN3Q13033 797 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 SEZ6Q53EL9 994 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 ATAT1Q5SQI0 421 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 FAM171A1Q5VUB5 890 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 APBB1IPQ7Z5R6 666 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 GPR149Q86SP6 731 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 RAD54LQ92698 747 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 EDAQ92838 391 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 EPSTI1Q96J88 318 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 CLIC6Q96NY7 704 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 PPP1R10Q96QC0 940 aaKnown RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 CCDC94Q9BW85 323 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 GOLGA2P5Q9HBQ8 144 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 KCND2Q9NZV8 630 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 ANKFY1Q9P2R3 1169 aa9.4□□□□□ -0.9
PDPN-209ENST00000510906 FBXO2Q9UK22 296 aaPredicted RBP9.4□□□□□ -0.9
PDPN-209ENST00000510906 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 TGM5O43548 720 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 TOM1L1O75674 476 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 RFPL2O75678 378 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 B3GAT3O94766 335 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 CLCNKBP51801 687 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 YARSP54577 528 aaKnown RBP9.39□□□□□ -0.91
PDPN-209ENST00000510906 NCKAP1LP55160 1127 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 ZXDAP98168 799 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 PSMD2Q13200 908 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 XKR4Q5GH76 650 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 CD300LGQ6UXG3 332 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 ALKAL1Q6UXT8 129 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 HAUS6Q7Z4H7 955 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 GPR65Q8IYL9 337 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 ZMAT2Q96NC0 199 aaKnown RBP9.39□□□□□ -0.91
PDPN-209ENST00000510906 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 TTPALQ9BTX7 342 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 HAPLN2Q9GZV7 340 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDPN-209ENST00000510906 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
PDPN-209ENST00000510906 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
PDPN-209ENST00000510906 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 ODF2LQ9ULJ1 636 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 NR2E1Q9Y466 385 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
PDPN-209ENST00000510906 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
PDPN-209ENST00000510906 CCDC195A0A1B0GUA6 201 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 I3L4J1 428 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 K7ENM7 598 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 ATXN7O15265 892 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 ADAM12O43184 909 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 STX6O43752 255 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 KRT18P05783 430 aaKnown RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 BRCC3P46736 316 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 ZNF131P52739 623 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 MCL1Q07820 350 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDPN-209ENST00000510906 PSMD5Q16401 504 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 PTPN21Q16825 1174 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 UPP1Q16831 310 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 LILRA6Q6PI73 481 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 CCDC149Q6ZUS6 474 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 HFE2Q6ZVN8 426 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 MYCT1Q8N699 235 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 TDRD5Q8NAT2 981 aaKnown RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 CMASQ8NFW8 434 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms