RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 IL31Q6EBC2 164 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 SENP8Q96LD8 212 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 TMEM209Q96SK2 561 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 PLIN2Q99541 437 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 KIF2CQ99661 725 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 SEPT5Q99719 369 aaPredicted RBP11.3□□□□□ -0.6
DDX41-211ENST00000510171 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
DDX41-211ENST00000510171 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 LARSQ9P2J5 1176 aaKnown RBP11.3□□□□□ -0.6
DDX41-211ENST00000510171 KIF3AQ9Y496 699 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 MIA3Q5JRA6 1907 aa11.3□□□□□ -0.6
DDX41-211ENST00000510171 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 OGTO15294 1046 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 ATG13O75143 517 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 CDC25CP30307 473 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 SLC12A3P55017 1021 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 TNK2Q07912 1038 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 RABEP1Q15276 862 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 ENOX2Q16206 610 aaKnown RBP11.29□□□□□ -0.6
DDX41-211ENST00000510171 TAF12Q16514 161 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 ITPRIPL2Q3MIP1 535 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 MGAT5BQ3V5L5 792 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 AASDHQ4L235 1098 aaPredicted RBP11.29□□□□□ -0.6
DDX41-211ENST00000510171 HYIQ5T013 277 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 CACNA2D4Q7Z3S7 1137 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 CD302Q8IX05 232 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
DDX41-211ENST00000510171 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 LOXL4Q96JB6 756 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
DDX41-211ENST00000510171 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
DDX41-211ENST00000510171 GKN1Q9NS71 199 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 WDR87Q6ZQQ6 2873 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 DNAH14Q0VDD8 3507 aa11.29□□□□□ -0.6
DDX41-211ENST00000510171 FRYLO94915 3013 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 A0A0B4J269 797 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 CCDC163A0A0D9SF12 145 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 PPEF2O14830 753 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
DDX41-211ENST00000510171 EXTL3O43909 919 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 CYP11A1P05108 521 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 ADRB2P07550 413 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 SCP2P22307 547 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 HOXC13P31276 330 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 MCM2P49736 904 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 LIMK1P53667 647 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 NCKAP1LP55160 1127 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 CYP4F8P98187 520 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
DDX41-211ENST00000510171 GRSF1Q12849 480 aaKnown RBP eCLIP11.28□□□□□ -0.6
DDX41-211ENST00000510171 SF3A2Q15428 464 aaKnown RBP11.28□□□□□ -0.6
DDX41-211ENST00000510171 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 JADE1Q6IE81 842 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 OR10T2Q8NGX3 314 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 GAB3Q8WWW8 586 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 KCNN1Q92952 543 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 SLC46A2Q9BY10 475 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 DSEQ9UL01 958 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 TBX20Q9UMR3 447 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 SLC8A2Q9UPR5 921 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 F5P12259 2224 aa11.28□□□□□ -0.6
DDX41-211ENST00000510171 PIRO00625 290 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 FAM189A1O60320 539 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 PIGRP01833 764 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 ZNF806P0C7X5 589 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 CCDC192P0DO97 292 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 PXNP49023 591 aaPredicted RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 CDR1P51861 262 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 AMPD2Q01433 879 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 RUNX3Q13761 415 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 TMEM132DQ14C87 1099 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 CCDC6Q16204 474 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 CMTM8Q8IZV2 173 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 MYCT1Q8N699 235 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 GIPC2Q8TF65 315 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 C2orf15Q8WU43 125 aaKnown RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 MSTO1Q9BUK6 570 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 SMG9Q9H0W8 520 aaKnown RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 CPSF3Q9UKF6 684 aaKnown RBP11.27□□□□□ -0.61
DDX41-211ENST00000510171 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
DDX41-211ENST00000510171 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms