RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NECTIN4Q96NY8 510 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 RHOBTB2Q9BYZ6 727 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 ZCWPW1Q9H0M4 648 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 DNAJC25Q9H1X3 360 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 PIDD1Q9HB75 910 aa14.6□□□□□ -0.07
SNF8-206ENST00000509989 CGNQ9P2M7 1197 aaKnown RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 AFF4Q9UHB7 1163 aaKnown RBP14.6□□□□□ -0.07
SNF8-206ENST00000509989 ARHGEF37A1IGU5 675 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 PI4K2BG5E9Z4 385 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 CALUO43852 315 aaPredicted RBP14.59□□□□□ -0.07
SNF8-206ENST00000509989 KINO60870 393 aaKnown RBP14.59□□□□□ -0.07
SNF8-206ENST00000509989 C1RP00736 705 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 LMO2P25791 158 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 GPR15P49685 360 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 PPP3CAQ08209 521 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 GPR17Q13304 367 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 SLC39A12Q504Y0 691 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 CENPPQ6IPU0 288 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 CCDC149Q6ZUS6 474 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 LIMS2Q7Z4I7 341 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 TCEAL8Q8IYN2 117 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 ADSSL1Q8N142 457 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 LRRC52Q8N7C0 313 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 TMEM174Q8WUU8 243 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 ING5Q8WYH8 240 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 CCDC47Q96A33 483 aaKnown RBP14.59□□□□□ -0.07
SNF8-206ENST00000509989 ZNF560Q96MR9 790 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 GSDMAQ96QA5 445 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 FNBP1Q96RU3 617 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 PKMYT1Q99640 499 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 RPP25Q9BUL9 199 aaKnown RBP14.59□□□□□ -0.07
SNF8-206ENST00000509989 SDCBP2Q9H190 292 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 XYLT2Q9H1B5 865 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 GDAP2Q9NXN4 497 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 YIPF1Q9Y548 306 aa14.59□□□□□ -0.07
SNF8-206ENST00000509989 OR6C75A6NL08 312 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 PPP1R3GB7ZBB8 358 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 PRRG1O14668 218 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 HNRNPA1P09651 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNF8-206ENST00000509989 GJA1P17302 382 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 RAP1GAPP47736 663 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 UBE2HP62256 183 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 CLDN10P78369 228 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 TWF1Q12792 350 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 ADAM9Q13443 819 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 MORC3Q14149 939 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 SURF1Q15526 300 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 TPGS2Q68CL5 300 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 SPOPLQ6IQ16 392 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 GOLGA5Q8TBA6 731 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 GPR152Q8TDT2 470 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
SNF8-206ENST00000509989 MMRN2Q9H8L6 949 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 LMBRD1Q9NUN5 540 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 DDX43Q9NXZ2 648 aaKnown RBP14.58□□□□□ -0.08
SNF8-206ENST00000509989 RAPGEFL1Q9UHV5 662 aa14.58□□□□□ -0.08
SNF8-206ENST00000509989 ZNF638Q14966 1978 aaKnown RBP14.58□□□□□ -0.08
SNF8-206ENST00000509989 ANAPC1Q9H1A4 1944 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 MYH10P35580 1976 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 MOSPD3O75425 235 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 CEBPBP17676 345 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 ATF6P18850 670 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 HOXA9P31269 272 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 GBP2P32456 591 aaPredicted RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 PNPLA4P41247 253 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 CDH8P55286 799 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 MYBPC2Q14324 1141 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 NFIL3Q16649 462 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 UVSSAQ2YD98 709 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 SDHAF4Q5VUM1 108 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 ELOA2Q8IYF1 753 aaPredicted RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 ADGRF2Q8IZF7 708 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 TDRD5Q8NAT2 981 aaKnown RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 MED15Q96RN5 788 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 DUSP9Q99956 384 aaKnown RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 CORO1BQ9BR76 489 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 PI4K2AQ9BTU6 479 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 LRRC3Q9BY71 257 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 DPEP3Q9H4B8 488 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
SNF8-206ENST00000509989 ZNF334Q9HCZ1 680 aaPredicted RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
SNF8-206ENST00000509989 MYBPHLA2RUH7 354 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 GABRDO14764 452 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 DCXO43602 365 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 NARSO43776 548 aaKnown RBP14.56□□□□□ -0.08
SNF8-206ENST00000509989 HUS1O60921 280 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 SMC2O95347 1197 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 RHOP08100 348 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 PDGFRBP09619 1106 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 FSHRP23945 695 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 ELF1P32519 619 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 GCLMP48507 274 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 VAMP7P51809 220 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 STX17P56962 302 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 BIRC3Q13489 604 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 COBLL1Q53SF7 1204 aa14.56□□□□□ -0.08
SNF8-206ENST00000509989 PRSS36Q5K4E3 855 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms