RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SLX4Q8IY92 1834 aa5.42□□□□□ -1.54
PHF3-210ENST00000509876 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 FTLP02792 175 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 SLC1A1P43005 524 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 BST2Q10589 180 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 PSMD5Q16401 504 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ZNF697Q5TEC3 545 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PLPP4Q5VZY2 271 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CHSY1Q86X52 802 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 LPPQ93052 612 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 TTC25Q96NG3 672 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PI4K2AQ9BTU6 479 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 KLHL8Q9P2G9 620 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 F5H5T6 163 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 H0Y626 953 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ZNF197O14709 1029 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MAP3K7O43318 606 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SETSIPP0DME0 302 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ACRP10323 421 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PAMP19021 973 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 MAP3K10Q02779 954 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SMARCB1Q12824 385 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ANO4Q32M45 955 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PALB2Q86YC2 1186 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PARD3BQ8TEW8 1205 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ATP2A3Q93084 1043 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 TMEM176AQ96HP8 235 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 XPO6Q96QU8 1125 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 MCOLN1Q9GZU1 580 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ABHD10Q9NUJ1 306 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 BARX2Q9UMQ3 279 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 MYH2Q9UKX2 1941 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PIK3R2O00459 728 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 NDUFA10O95299 355 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CCNE2O96020 404 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 RHOXF2BP0C7M4 288 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 BRD2P25440 801 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 CYP2C18P33260 490 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 NCKAP1LP55160 1127 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 JAG1P78504 1218 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ATP11AP98196 1134 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MTMR3Q13615 1198 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SEPT6Q14141 434 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MORN1Q5T089 497 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SARM1Q6SZW1 724 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ANO5Q75V66 913 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 RHOXF2Q9BQY4 288 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SPTLC3Q9NUV7 552 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 EEF2KO00418 725 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 SLC9A3R1O14745 358 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 APOL1O14791 398 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ATP1A3P13637 1013 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PDGFRAP16234 1089 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 GPD1P21695 349 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 RAP1GAPP47736 663 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 OXCT1P55809 520 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MAP3K7CLP57077 242 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 FUT2Q10981 343 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CLEC17AQ6ZS10 378 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 DDX42Q86XP3 938 aaKnown RBP eCLIP5.41□□□□□ -1.54
PHF3-210ENST00000509876 UNC45BQ8IWX7 931 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ARNTL2Q8WYA1 636 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ASIC4Q96FT7 647 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 DMAP1Q9NPF5 467 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.41□□□□□ -1.545e-6■□□□□ 9.1
PHF3-210ENST00000509876 JRKLQ9Y4A0 524 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 INSL6Q9Y581 213 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SIPA1L3O60292 1781 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 OR6C75A6NL08 312 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 KIF3CO14782 793 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CPP00450 1065 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 UCHL3P15374 230 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 YWHAQP27348 245 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 MYL6P60660 151 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 GTF2BQ00403 316 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 DNAJC21Q5F1R6 531 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 CFAP157Q5JU67 520 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 MAMDC4Q6UXC1 1216 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ZNF557Q8N988 423 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 PDZD8Q8NEN9 1154 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PDCD6IPQ8WUM4 868 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 UBE2Q2Q8WVN8 375 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CYFIP2Q96F07 1278 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 RIPOR3Q96MK2 946 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 SAMD11Q96NU1 681 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 PPP1R2P1Q96PQ5 205 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 CWC15Q9P013 229 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 LY75O60449 1722 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 TRAV19A0A0A6YYK7 116 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ECEL1O95672 775 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ITGBL1O95965 494 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 F9P00740 461 aa5.41□□□□□ -1.54
PHF3-210ENST00000509876 ACO1P21399 889 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 CLK2P49760 499 aaKnown RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 ZNF177Q13360 481 aaPredicted RBP5.41□□□□□ -1.54
PHF3-210ENST00000509876 PIGHQ14442 188 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms