RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 MSCO60682 206 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 GH1P01241 217 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 EDNRBP24530 442 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 ITGA8P53708 1063 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 TAOK1Q7L7X3 1001 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 PRUNE1Q86TP1 453 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 ERICH1Q86X53 443 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 FBXO16Q8IX29 292 aaPredicted RBP11.61□□□□□ -0.55
SEC31A-228ENST00000509142 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 CCDC89Q8N998 374 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 TRAPPC12Q8WVT3 735 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 MMP19Q99542 508 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 ELAC2Q9BQ52 826 aaKnown RBP11.61□□□□□ -0.55
SEC31A-228ENST00000509142 KDM4CQ9H3R0 1056 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 ACTR5Q9H9F9 607 aaPredicted RBP11.61□□□□□ -0.55
SEC31A-228ENST00000509142 SLC12A4Q9UP95 1085 aa11.61□□□□□ -0.55
SEC31A-228ENST00000509142 RLFQ13129 1914 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 GAS2O43903 313 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 AGTP01019 485 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 KRT1P04264 644 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ERO1BQ86YB8 467 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 DYDC1Q8WWB3 177 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 MCEEQ96PE7 176 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 SYNCQ9H7C4 482 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ADARB2Q9NS39 739 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 INTS9Q9NV88 658 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ZNF148Q9UQR1 794 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ARIH2O95376 493 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 TXNP10599 105 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ATF7IP2Q5U623 682 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 EXD1Q8NHP7 514 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 GPR20Q99678 358 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 TRAIPQ9BWF2 469 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 POLR2AP24928 1970 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 ASAP2O43150 1006 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 OAS1P00973 400 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 CAV1Q03135 178 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 CCNG2Q16589 344 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 CELF3Q5SZQ8 465 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 MOB2Q70IA6 237 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 KATNAL2Q8IYT4 538 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 SGSM3Q96HU1 749 aa11.6□□□□□ -0.55
SEC31A-228ENST00000509142 RBM41Q96IZ5 413 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 RPF1Q9H9Y2 349 aaKnown RBP11.6□□□□□ -0.55
SEC31A-228ENST00000509142 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 GOLGA8SH3BPF8 625 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 GJB1P08034 283 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 CLCN3P51790 818 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 YWHAEP62258 255 aaKnown RBP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 PTK6Q13882 451 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 ATP13A4Q4VNC1 1196 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 EFCAB12Q6NXP0 572 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 MPZL3Q6UWV2 235 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 BBOF1Q8ND07 529 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 COPS5Q92905 334 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 PPP1R16BQ96T49 567 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 PARP14Q460N5 1801 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 MGRN1O60291 552 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 KRT10P13645 584 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 OSBPP22059 807 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 MMP8P22894 467 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 PTP4A2Q12974 167 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 KYNUQ16719 465 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 TMEM63BQ5T3F8 832 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 MFSD5Q6N075 450 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 RCOR2Q8IZ40 523 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 SLCO2A1Q92959 643 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 LRRD1A4D1F6 860 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 DNAJC8O75937 253 aaPredicted RBP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 TJP3O95049 919 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
SEC31A-228ENST00000509142 LMNB2Q03252 620 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 MGARPQ8TDB4 240 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 CCDC77Q9BR77 488 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
SEC31A-228ENST00000509142 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
SEC31A-228ENST00000509142 CXCL11O14625 94 aa11.58□□□□□ -0.56
SEC31A-228ENST00000509142 CHUKO15111 745 aa11.58□□□□□ -0.56
SEC31A-228ENST00000509142 GHRP10912 638 aa11.58□□□□□ -0.56
SEC31A-228ENST00000509142 POLR2BP30876 1174 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms