RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MYBPC2Q14324 1141 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
CXCL1-202ENST00000509101 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 BPIFB1Q8TDL5 484 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 SPIRE2Q8WWL2 714 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 BICD1Q96G01 975 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 LPIN3Q9BQK8 851 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 PLEKHA5Q9HAU0 1116 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 RXFP3Q9NSD7 469 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 OBP2AQ9NY56 170 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 RPP40O75818 363 aaKnown RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 EPN2O95208 641 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 CLTAP09496 248 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 TYMPP19971 482 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 CYP3A5P20815 502 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 PMLP29590 882 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 MCM2P49736 904 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 CDR1P51861 262 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 ZBTB6Q15916 424 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 N4BP2L1Q5TBK1 243 aaPredicted RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 ITIH5Q86UX2 942 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 KBTBD6Q86V97 674 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 SYNPOQ8N3V7 929 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 GAB3Q8WWW8 586 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 SEPT5Q99719 369 aaPredicted RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 MMTAG2Q9BU76 263 aaKnown RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 SMG9Q9H0W8 520 aaKnown RBP17.37■□□□□ 0.37
CXCL1-202ENST00000509101 SMOC1Q9H4F8 434 aa17.37■□□□□ 0.37
CXCL1-202ENST00000509101 CACNA1GO43497 2377 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 LACTBL1A8MY62 500 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 XPOTO43592 962 aaKnown RBP17.36■□□□□ 0.37
CXCL1-202ENST00000509101 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 ODC1P11926 461 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 SMTNP53814 917 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 IL17AQ16552 155 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 ITPRIPL2Q3MIP1 535 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 ARMCX5Q6P1M9 558 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 CACNA2D4Q7Z3S7 1137 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 OR10T2Q8NGX3 314 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 GCNAQ96QF7 691 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 TASP1Q9H6P5 420 aa17.36■□□□□ 0.37
CXCL1-202ENST00000509101 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
CXCL1-202ENST00000509101 ZNF806P0C7X5 589 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 TOB1P50616 345 aaPredicted RBP17.35■□□□□ 0.37
CXCL1-202ENST00000509101 VEPH1Q14D04 833 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 ENOX2Q16206 610 aaKnown RBP17.35■□□□□ 0.37
CXCL1-202ENST00000509101 SLC39A12Q504Y0 691 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 LOXL4Q96JB6 756 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 SENP8Q96LD8 212 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 NUP205Q92621 2012 aa17.35■□□□□ 0.37
CXCL1-202ENST00000509101 NPHP3-ACAD11A0A0J9YXS1 232 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 TM4SF5O14894 197 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 NEFLP07196 543 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 ATF6P18850 670 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 WEE1P30291 646 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 CDC25CP30307 473 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 RAP1GAPP47736 663 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 LIG4P49917 911 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 LILRA4P59901 499 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 MGAT5BQ3V5L5 792 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 STPG1Q5TH74 334 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 FSTL4Q6MZW2 842 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 FAM212AQ96EL1 285 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 PLIN2Q99541 437 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 LLPHQ9BRT6 129 aaKnown RBP17.34■□□□□ 0.37
CXCL1-202ENST00000509101 IL21Q9HBE4 155 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 THG1LQ9NWX6 298 aaKnown RBP17.34■□□□□ 0.37
CXCL1-202ENST00000509101 HSFX1Q9UBD0 423 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 SLC8A2Q9UPR5 921 aa17.34■□□□□ 0.37
CXCL1-202ENST00000509101 FAM208BQ5VWN6 2430 aa17.33■□□□□ 0.37
CXCL1-202ENST00000509101 LAD1O00515 517 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 FAM189A1O60320 539 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 MPLP40238 635 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 PRPHP41219 470 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 GRSF1Q12849 480 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 PTPAQ15257 358 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 TAF12Q16514 161 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 TMEM196Q5HYL7 178 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 TRIM68Q6AZZ1 485 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 GIPC2Q8TF65 315 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 PNMA5Q96PV4 448 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 SLC46A2Q9BY10 475 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 RPF1Q9H9Y2 349 aaKnown RBP17.33■□□□□ 0.36
CXCL1-202ENST00000509101 HPS4Q9NQG7 708 aa17.33■□□□□ 0.36
CXCL1-202ENST00000509101 GKN1Q9NS71 199 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms