RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CNGA1P29973 690 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 MASP1P48740 699 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 ANXA11P50995 505 aaKnown RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 POU6F2P78424 691 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 CDC42EP1Q00587 391 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 FPGSQ05932 587 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 ZNF844Q08AG5 666 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 SLC10A2Q12908 348 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 GRM1Q13255 1194 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 HLXQ14774 488 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 ATP2B3Q16720 1220 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 TMEM119Q4V9L6 283 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 HSP90AB4PQ58FF6 505 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 CT47A1Q5JQC4 288 aaPredicted RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 FMNL3Q8IVF7 1028 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 RHOT1Q8IXI2 618 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 CFAP52Q8N1V2 620 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 TMIEQ8NEW7 156 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 TOR1AIP2Q8NFQ8 470 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 SEMA6DQ8NFY4 1073 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 COG1Q8WTW3 980 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 CHAC2Q8WUX2 184 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 RAB24Q969Q5 203 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 C8orf48Q96LL4 319 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 JKAMPQ9P055 326 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 MCM8Q9UJA3 840 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 TUBD1Q9UJT1 453 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 INTUQ9ULD6 942 aa3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 G3BP2Q9UN86 482 aaKnown RBP3.05□□□□□ -1.92
DEPDC1B-204ENST00000509006 ADGRA2Q96PE1 1338 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 CCDC195A0A1B0GUA6 201 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 E7ENX8 843 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 E9PLN8 166 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 GCOM1H8Y6P7 765 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SGTAO43765 313 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 CREB3O43889 395 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 CAND2O75155 1236 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 MOSPD3O75425 235 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 MAP4K4O95819 1239 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 CHRM2P08172 466 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 VIL1P09327 827 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 MTHFD1P11586 935 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 TKTP29401 623 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 FOXG1P55316 489 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 NXPH1P58417 271 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 TAP2Q03519 686 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 ITIH3Q06033 890 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 RALBP1Q15311 655 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 INAVAQ3KP66 663 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 LONRF3Q496Y0 759 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 ZNF365Q70YC5 407 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 KRT26Q7Z3Y9 468 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SPATS2Q86XZ4 545 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 NSUN7Q8NE18 718 aaKnown RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SSH1Q8WYL5 1049 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SNX19Q92543 992 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 RFKQ969G6 155 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 TMX3Q96JJ7 454 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 PBKQ96KB5 322 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 MRGPRX4Q96LA9 322 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 VKORC1Q9BQB6 163 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 KLC4Q9NSK0 619 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 MTMR4Q9NYA4 1195 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SERGEFQ9UGK8 458 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 SLC45A2Q9UMX9 530 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 ST3GAL5Q9UNP4 418 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 BTBD3Q9Y2F9 522 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 LRP12Q9Y561 859 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 COMMD10Q9Y6G5 202 aa3.04□□□□□ -1.92
DEPDC1B-204ENST00000509006 KRT18P05783 430 aaKnown RBP3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 EDNRBP24530 442 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 PCSK6P29122 969 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 EPHB2P29323 1055 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 TBX4P57082 545 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 ZNF280AP59817 542 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 KLF1Q13351 362 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 BRD3Q15059 726 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 ZRSR2Q15696 482 aaKnown RBP3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 AWAT2Q6E213 333 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 RASAL3Q86YV0 1011 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 WDR66Q8TBY9 1149 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 POC1BQ8TC44 478 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 HAPLN3Q96S86 360 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 DMRTA2Q96SC8 542 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 FAM126AQ9BYI3 521 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 TDP1Q9NUW8 608 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 SLC52A1Q9NWF4 448 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 TBC1D30Q9Y2I9 924 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 IPPQ9Y573 584 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 PCDHA13Q9Y5I0 950 aa3.03□□□□□ -1.92
DEPDC1B-204ENST00000509006 PHLDB1Q86UU1 1377 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 SPATA31A3Q5VYP0 1347 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 WASHC2AQ641Q2 1341 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 TOR1BO14657 336 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 SH3BP5O60239 455 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 URI1O94763 535 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 CD1AP06126 327 aa3.02□□□□□ -1.93
DEPDC1B-204ENST00000509006 HSP90AA1P07900 732 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms