RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
CAST-223ENST00000508608 ETNK1Q9HBU6 452 aa13.79□□□□□ -0.2
CAST-223ENST00000508608 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
CAST-223ENST00000508608 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
CAST-223ENST00000508608 DONSONQ9NYP3 566 aa13.79□□□□□ -0.2
CAST-223ENST00000508608 L3MBTL1Q9Y468 752 aa13.79□□□□□ -0.2
CAST-223ENST00000508608 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 POC1B-GALNT4F8VUJ3 575 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 CFHP08603 1231 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 GCAP28676 217 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 PARP6Q2NL67 630 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
CAST-223ENST00000508608 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 RPAP3Q9H6T3 665 aaPredicted RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 PCDH9Q9HC56 1237 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 SSU72Q9NP77 194 aaKnown RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 PSMC3IPQ9P2W1 217 aaPredicted RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 VWA5AO00534 786 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 SPAG7O75391 227 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 STAM2O75886 525 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 ITGAVP06756 1048 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 KRT10P13645 584 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 NAMPTP43490 491 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 ACTR2P61160 394 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 MFSD7Q6UXD7 560 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 INPP5DQ92835 1189 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
CAST-223ENST00000508608 ANKRD27Q96NW4 1050 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 KLHL11Q9NVR0 708 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 FETUBQ9UGM5 382 aa13.78□□□□□ -0.2
CAST-223ENST00000508608 PHIPQ8WWQ0 1821 aa13.77□□□□□ -0.2
CAST-223ENST00000508608 DOCK1Q14185 1865 aa13.77□□□□□ -0.2
CAST-223ENST00000508608 ALOX15BO15296 676 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
CAST-223ENST00000508608 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
CAST-223ENST00000508608 CA4P22748 312 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 PHBP35232 272 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 RASSF2P50749 326 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 ZNF132P52740 706 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 AP3M2P53677 418 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 MOGSQ13724 837 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
CAST-223ENST00000508608 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 GNPTABQ3T906 1256 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 RNASEH2BQ5TBB1 312 aaKnown RBP13.77□□□□□ -0.21
CAST-223ENST00000508608 HHATQ5VTY9 493 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 DCUN1D2Q6PH85 259 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 PRUNE1Q86TP1 453 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 ZBED8Q8IZ13 594 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 ZNF606Q8WXB4 792 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 MIEF2Q96C03 454 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
CAST-223ENST00000508608 MYLK2Q9H1R3 596 aa13.77□□□□□ -0.21
CAST-223ENST00000508608 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 K7ERI5 159 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 WNT7BP56706 349 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
CAST-223ENST00000508608 MTMR2Q13614 643 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 NCOA4Q13772 614 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 OASLQ15646 514 aaKnown RBP13.76□□□□□ -0.21
CAST-223ENST00000508608 ABHD15Q6UXT9 468 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 PRCCQ92733 491 aaPredicted RBP13.76□□□□□ -0.21
CAST-223ENST00000508608 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 FRMD8P1Q9BZ68 369 aaPredicted RBP13.76□□□□□ -0.21
CAST-223ENST00000508608 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 TRIM33Q9UPN9 1127 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 COL4A5P29400 1685 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 WNT10BO00744 389 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 ZWINTO95229 277 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 SP4Q02446 784 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
CAST-223ENST00000508608 HIF1AQ16665 826 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 GLIS1Q8NBF1 620 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 TMEM35BQ8NCS4 154 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 MCEEQ96PE7 176 aa13.76□□□□□ -0.21
CAST-223ENST00000508608 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms