RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 KANSL1LA0AUZ9 987 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 CYB561D2O14569 222 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 IL18RAPO95256 599 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 GARTP22102 1010 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 PAX3P23760 479 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 VIPR2P41587 438 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 TAF6P49848 677 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 FOXK2Q01167 660 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 PRKCQQ04759 706 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 PKP1Q13835 747 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 WSCD1Q658N2 575 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 VITQ6UXI7 678 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 ELMOD1Q8N336 334 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 RSPRY1Q96DX4 576 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
LMNA-222ENST00000508500 MKNK1Q9BUB5 465 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 TRIM9Q9C026 710 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 ZCWPW1Q9H0M4 648 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 PCIF1Q9H4Z3 704 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 ASAH2Q9NR71 780 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 HEBP1Q9NRV9 189 aa17.52■□□□□ 0.4
LMNA-222ENST00000508500 YEATS4O95619 227 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 RFX1P22670 979 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 FZD5Q13467 585 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
LMNA-222ENST00000508500 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
LMNA-222ENST00000508500 GAREM2Q75VX8 874 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 NT5DC4Q86YG4 428 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 MAML2Q8IZL2 1156 aaPredicted RBP17.51■□□□□ 0.39
LMNA-222ENST00000508500 ADSSL1Q8N142 457 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 C1orf127Q8N9H9 656 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 SHDQ96IW2 340 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
LMNA-222ENST00000508500 TNMDQ9H2S6 317 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 ZFP14Q9HCL3 533 aa17.51■□□□□ 0.39
LMNA-222ENST00000508500 A0A1W2PRU2 124 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 KPNA7A9QM74 516 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 CUTAO60888 179 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 F13A1P00488 732 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 ITGB3P05106 788 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 ZSCAN22P10073 491 aaPredicted RBP17.5■□□□□ 0.39
LMNA-222ENST00000508500 ATF6P18850 670 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 CASP1P29466 404 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 POLR2BP30876 1174 aaKnown RBP17.5■□□□□ 0.39
LMNA-222ENST00000508500 PFKPQ01813 784 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 ALCAMQ13740 583 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 SLC39A12Q504Y0 691 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 DNAJB7Q7Z6W7 309 aaPredicted RBP17.5■□□□□ 0.39
LMNA-222ENST00000508500 GPIHBP1Q8IV16 184 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 CCDC65Q8IXS2 484 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 SYCP3Q8IZU3 236 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 LEMD2Q8NC56 503 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 ZSCAN18Q8TBC5 510 aaPredicted RBP17.5■□□□□ 0.39
LMNA-222ENST00000508500 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 PSMG2Q969U7 264 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 DHX58Q96C10 678 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 LPIN3Q9BQK8 851 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 TRPV4Q9HBA0 871 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 PDE11AQ9HCR9 933 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 LTB4R2Q9NPC1 389 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 TMLHEQ9NVH6 421 aa17.5■□□□□ 0.39
LMNA-222ENST00000508500 RBAKQ9NYW8 714 aaPredicted RBP17.5■□□□□ 0.39
LMNA-222ENST00000508500 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 ATG2BQ96BY7 2078 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 EXTL3O43909 919 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 LDHAP00338 332 aaKnown RBP17.49■□□□□ 0.39
LMNA-222ENST00000508500 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
LMNA-222ENST00000508500 ALDH1A3P47895 512 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 EPHB3P54753 998 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 TFAMQ00059 246 aaKnown RBP17.49■□□□□ 0.39
LMNA-222ENST00000508500 PLD1Q13393 1074 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 TPRG1Q6ZUI0 275 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 EPM2AIP1Q7L775 607 aaPredicted RBP17.49■□□□□ 0.39
LMNA-222ENST00000508500 C1orf210Q8IVY1 113 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 ZNF687Q8N1G0 1237 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 LRRC3BQ96PB8 259 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 SIX4Q9UIU6 781 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 DSEQ9UL01 958 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 AGAP1Q9UPQ3 857 aa17.49■□□□□ 0.39
LMNA-222ENST00000508500 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 ARNTLO00327 626 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 EHHADHQ08426 723 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 UBXN2BQ14CS0 331 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 SV2CQ496J9 727 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 LMBRD2Q68DH5 695 aaPredicted RBP17.48■□□□□ 0.39
LMNA-222ENST00000508500 CNNM4Q6P4Q7 775 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 OSTM1Q86WC4 334 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 DNASE1L2Q92874 299 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 C7orf25Q9BPX7 421 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 TRMT61BQ9BVS5 477 aaKnown RBP17.48■□□□□ 0.39
LMNA-222ENST00000508500 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 SEMA4AQ9H3S1 761 aa17.48■□□□□ 0.39
LMNA-222ENST00000508500 CUEDC2Q9H467 287 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms