RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PSMG2Q969U7 264 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 CLDN23Q96B33 292 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 SAAL1Q96ER3 474 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 BORCS6Q96GS4 357 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ACCSQ96QU6 501 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 TRMT61BQ9BVS5 477 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ZCWPW1Q9H0M4 648 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 BRD9Q9H8M2 597 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ZNF334Q9HCZ1 680 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 HSFX1Q9UBD0 423 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 DSEQ9UL01 958 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 EXOC7Q9UPT5 735 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 CACNA1AO00555 2505 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 OBSL1O75147 1896 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 KIF26AQ9ULI4 1882 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 CEP250Q9BV73 2442 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 ARNTLO00327 626 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 CYB561D2O14569 222 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 IDEP14735 1019 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 ALDH1A3P47895 512 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 FZD5Q13467 585 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 SLC39A12Q504Y0 691 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 ARMCX5Q6P1M9 558 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 ZC3H14Q6PJT7 736 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 NT5DC4Q86YG4 428 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 PDILTQ8N807 584 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 DEPDC1BQ8WUY9 529 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 IRF7Q92985 503 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 CBWD1Q9BRT8 395 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 SLITRK6Q9H5Y7 841 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 TRPV5Q9NQA5 729 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 SPATA6Q9NWH7 488 aaPredicted RBP14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 DENND4CQ5VZ89 1909 aa14.05□□□□□ -0.16
HMGCS1-205ENST00000508319 HEPACAM2A8MVW5 462 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 ATF6P18850 670 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 GARTP22102 1010 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 GDI1P31150 447 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 MAGEA9P43362 315 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 RPS9P46781 194 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 CDR1P51861 262 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 ALCAMQ13740 583 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 STK38Q15208 465 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 E2F4Q16254 413 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 SV2CQ496J9 727 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 DNAJB7Q7Z6W7 309 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 LRRTM3Q86VH5 581 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 FAM84AQ96KN4 292 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 ZNF560Q96MR9 790 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 NELL2Q99435 816 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 SEPT5Q99719 369 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 GPR88Q9GZN0 384 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 MRPS17Q9Y2R5 130 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
HMGCS1-205ENST00000508319 KPNA7A9QM74 516 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 LAMTOR5O43504 91 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 ITGB3P05106 788 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 POLR2BP30876 1174 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 TFAMQ00059 246 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 FCHO2Q0JRZ9 810 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 ZNF528Q3MIS6 628 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 ITIH5Q86UX2 942 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 MFSD6LQ8IWD5 586 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 TNMDQ9H2S6 317 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 FBXO4Q9UKT5 387 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 PIAS3Q9Y6X2 628 aa14.03□□□□□ -0.16
HMGCS1-205ENST00000508319 GOLGA8IPA6NC78 632 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 GOLGA8JA6NMD2 632 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 MAN2B1O00754 1011 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 ZNF263O14978 683 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 SPTLC2O15270 562 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 NCAM2O15394 837 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 PPP6R2O75170 966 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 FGF19O95750 216 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 GABRR2P28476 465 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 PNPLA4P41247 253 aa14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-205ENST00000508319 MGAT5BQ3V5L5 792 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms