RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TUBB3Q13509 450 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 STAT4Q14765 748 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 AWAT2Q6E213 333 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 SLC18B1Q6NT16 456 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 CEP85Q6P2H3 762 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 KRT26Q7Z3Y9 468 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 AFAP1L2Q8N4X5 818 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 ATL2Q8NHH9 583 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 TRIB1Q96RU8 372 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 ADGRE3Q9BY15 652 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 EHD3Q9NZN3 535 aa5.7□□□□□ -1.5
TRAPPC13-209ENST00000508304 E9PLN8 166 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 JTBO76095 146 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 CDC42EP1Q00587 391 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 PLAC9Q5JTB6 97 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 CEP78Q5JTW2 689 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 WDR66Q8TBY9 1149 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 FBXO41Q8TF61 875 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 FKBP10Q96AY3 582 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 OSBPL9Q96SU4 736 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 VKORC1Q9BQB6 163 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 SH2D3AQ9BRG2 576 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 ANLNQ9NQW6 1124 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 TDP1Q9NUW8 608 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 DKK3Q9UBP4 350 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 PCDHB1Q9Y5F3 818 aa5.69□□□□□ -1.5
TRAPPC13-209ENST00000508304 PRKD3O94806 890 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 VIL1P09327 827 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 CBSLP0DN79 551 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 JUPP14923 745 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 SFPQP23246 707 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 CBSP35520 551 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 RNF219Q5W0B1 726 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 ZNF551Q7Z340 670 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 SPATS2Q86XZ4 545 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 AMBRA1Q9C0C7 1298 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC13-209ENST00000508304 F5H697 171 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 MYO1FO00160 1098 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 ZNF213O14771 459 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 TRIAP1O43715 76 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 ANXA1P04083 346 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 TUBB4AP04350 444 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 CYP2D6P10635 497 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 ZNF280AP59817 542 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 BMPR2Q13873 1038 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 SMOQ99835 787 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 TPSD1Q9BZJ3 242 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 ELOVL5Q9NYP7 299 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 SH3BP4Q9P0V3 963 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 ZNF580Q9UK33 172 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 WASHC2AQ641Q2 1341 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 CADPSQ9ULU8 1353 aa5.67□□□□□ -1.5
TRAPPC13-209ENST00000508304 GPR39O43194 453 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 LPOP22079 712 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 NR4A2P43354 598 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 NDUFV1P49821 464 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 ERVK-21P61565 698 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 LAMB3Q13751 1172 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 PRAMEF17Q5VTA0 474 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 RUSC1-AS1Q66K80 236 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 SLC2A7Q6PXP3 512 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 MIGA2Q7L4E1 593 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 ANKRD13AQ8IZ07 590 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 TBC1D5Q92609 795 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 MRGPRX4Q96LA9 322 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 SPRTNQ9H040 489 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 PCDHA13Q9Y5I0 950 aa5.66□□□□□ -1.5
TRAPPC13-209ENST00000508304 SGTAO43765 313 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 EYA4O95677 639 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 ONECUT2O95948 504 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 RNF187Q5TA31 235 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 AMOTL1Q8IY63 956 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 AOPEPQ8N6M6 819 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 PPM1NQ8N819 430 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 ARHGEF3Q9NR81 526 aa5.65□□□□□ -1.5
TRAPPC13-209ENST00000508304 PRRT4C9JH25 899 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 POLRMTO00411 1230 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 ADAMTS3O15072 1205 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 INSIG1O15503 277 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 FAM163BP0C2L3 166 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 NDUFB7P17568 137 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 TLE1Q04724 770 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 RAPGEF1Q13905 1077 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 RAB39AQ14964 217 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 TBCCQ15814 346 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 SLC30A10Q6XR72 485 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 KRT73Q86Y46 540 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 SSH1Q8WYL5 1049 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 VPS16Q9H269 839 aa5.64□□□□□ -1.51
TRAPPC13-209ENST00000508304 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms