RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
RNF4-210ENST00000508235 ADAM7Q9H2U9 754 aa16.1■□□□□ 0.17
RNF4-210ENST00000508235 GRXCR2A6NFK2 248 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 MBTPS2O43462 519 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
RNF4-210ENST00000508235 ABLIM3O94929 683 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 HNRNPA1P09651 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
RNF4-210ENST00000508235 PCSK1P29120 753 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 HOXA9P31269 272 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 GCLMP48507 274 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 MXI1P50539 228 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 KCNQ1P51787 676 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 PPP3CAQ08209 521 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 GPR17Q13304 367 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 DCP1BQ8IZD4 617 aaKnown RBP16.09■□□□□ 0.17
RNF4-210ENST00000508235 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
RNF4-210ENST00000508235 RIPOR3Q96MK2 946 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 NECTIN4Q96NY8 510 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 RHOBTB2Q9BYZ6 727 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 XYLT2Q9H1B5 865 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 S1PR5Q9H228 398 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 MMRN2Q9H8L6 949 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
RNF4-210ENST00000508235 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
RNF4-210ENST00000508235 BRWD1Q9NSI6 2320 aa16.08■□□□□ 0.17
RNF4-210ENST00000508235 WDR27A2RRH5 827 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 PRRG1O14668 218 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 ZMYND10O75800 440 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 VNN1O95497 513 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 C8AP07357 584 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 SPATA31D3P0C874 917 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 MTHFRP42898 656 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 TSPY1Q01534 308 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 CETN1Q12798 172 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 KLHL40Q2TBA0 621 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 SCARA3Q6AZY7 606 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 SPATA31D4Q6ZUB0 917 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 LIMS2Q7Z4I7 341 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 FAM114A1Q8IWE2 563 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 C2orf15Q8WU43 125 aaKnown RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 ACBD6Q9BR61 282 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 ZCWPW1Q9H0M4 648 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 DDX43Q9NXZ2 648 aaKnown RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 HSFX1Q9UBD0 423 aa16.08■□□□□ 0.16
RNF4-210ENST00000508235 NXF1Q9UBU9 619 aaKnown RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 USP15Q9Y4E8 981 aaPredicted RBP16.08■□□□□ 0.16
RNF4-210ENST00000508235 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 GABRDO14764 452 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 TACC1O75410 805 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 ASS1P00966 412 aaKnown RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 BMP1P13497 986 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 WARSP23381 471 aaKnown RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 ADCY1Q08828 1119 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 CBX2Q14781 532 aaPredicted RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 SMAD2Q15796 467 aaKnown RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 STX1AQ16623 288 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 CAVIN1Q6NZI2 390 aaKnown RBP16.07■□□□□ 0.16
RNF4-210ENST00000508235 GPR149Q86SP6 731 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 TCEAL8Q8IYN2 117 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 FBXL13Q8NEE6 735 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 SLC7A14Q8TBB6 771 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 SUSD6Q92537 303 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 SLC35C1Q96A29 364 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 FAXDC2Q96IV6 333 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 THAP9Q9H5L6 903 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
RNF4-210ENST00000508235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
RNF4-210ENST00000508235 XYLBO75191 536 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 PAPLNO95428 1278 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 POU2F2P09086 479 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 MAPRE1Q15691 268 aaKnown RBP16.06■□□□□ 0.16
RNF4-210ENST00000508235 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 TMC5Q6UXY8 1006 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 RNF19BQ6ZMZ0 732 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 C12orf76Q8N812 135 aaPredicted RBP16.06■□□□□ 0.16
RNF4-210ENST00000508235 OR6B3Q8NGW1 331 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 OR10T2Q8NGX3 314 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 RTP3Q9BQQ7 232 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 DNAI2Q9GZS0 605 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 PIDD1Q9HB75 910 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 CYP4F11Q9HBI6 524 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 RAB20Q9NX57 234 aa16.06■□□□□ 0.16
RNF4-210ENST00000508235 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
RNF4-210ENST00000508235 PRKAG3Q9UGI9 489 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms