RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 NAB2Q15742 525 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
PROM1-207ENST00000508167 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 TOP1MTQ969P6 601 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 PTPRJQ12913 1337 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 P4HA2O15460 535 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
PROM1-207ENST00000508167 CD19P15391 556 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 CLCNKBP51801 687 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 MFAP3P55082 362 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 SV2CQ496J9 727 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 METTL23Q86XA0 190 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 UBXN4Q92575 508 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 EHD2Q9NZN4 543 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 STXBP5LQ9Y2K9 1186 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 DERAQ9Y315 318 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 INSL6Q9Y581 213 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
PROM1-207ENST00000508167 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 ZNF280BQ86YH2 543 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 TMEM130Q8N3G9 435 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 DNAJC12Q9UKB3 198 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 GRID2IPA4D2P6 1211 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 I3L4J1 428 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 PTGESO14684 152 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 FAM189A1O60320 539 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 KCNE1P15382 129 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 PNPLA4P41247 253 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 FAM189BP81408 668 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 ITIH3Q06033 890 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 SHHQ15465 462 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 EPC2Q52LR7 807 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 SLC9A7Q96T83 725 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 PCDHB4Q9Y5E5 795 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 F8VZ95 297 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 H3BQF6 201 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 DDX3XO00571 662 aaKnown RBP eCLIP11.74□□□□□ -0.53
PROM1-207ENST00000508167 NCK2O43639 380 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 C4BPAP04003 597 aaKnown RBP11.74□□□□□ -0.53
PROM1-207ENST00000508167 CDR1P51861 262 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 RABGGTBP53611 331 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 ARPP19P56211 112 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 C16orf59Q7L2K0 433 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
PROM1-207ENST00000508167 CEP112Q8N8E3 955 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 ZNF558Q96NG5 402 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 SMARCAL1Q9NZC9 954 aa11.74□□□□□ -0.53
PROM1-207ENST00000508167 TIMM13Q9Y5L4 95 aaPredicted RBP11.74□□□□□ -0.53
PROM1-207ENST00000508167 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 YWHAEP62258 255 aaKnown RBP11.73□□□□□ -0.53
PROM1-207ENST00000508167 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
PROM1-207ENST00000508167 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 APPL2Q8NEU8 664 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 CCDC42Q96M95 316 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 TEX35Q5T0J7 233 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 MEI1Q5TIA1 1274 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 SFMBT2Q5VUG0 894 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 PALB2Q86YC2 1186 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 TATDN2Q93075 761 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 DNAJB4Q9UDY4 337 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
PROM1-207ENST00000508167 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 MACROD2A1Z1Q3 448 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 GRXCR1A8MXD5 290 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 KPNA7A9QM74 516 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 C2CD2LO14523 706 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 KRT17Q04695 432 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
PROM1-207ENST00000508167 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 HDAC7Q8WUI4 952 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 SEMA4DQ92854 862 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
PROM1-207ENST00000508167 TSPAN18Q96SJ8 248 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 SAR1BQ9Y6B6 198 aa11.73□□□□□ -0.53
PROM1-207ENST00000508167 CYB561D2O14569 222 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 PMM2O15305 246 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 KRT86O43790 486 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 LPXNO60711 386 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 GJB5O95377 273 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
PROM1-207ENST00000508167 BRCC3P46736 316 aa11.72□□□□□ -0.53
PROM1-207ENST00000508167 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms