RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TRAPPC9Q96Q05 1148 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 FIZ1Q96SL8 496 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PCDHB18PQ96TA0 734 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PAIP2Q9BPZ3 127 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF577Q9BSK1 485 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM192AQ9GZU8 254 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MTFR1LQ9H019 292 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MYLK2Q9H1R3 596 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MMADHCQ9H3L0 296 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC4CQ9HCJ2 640 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMEM8AQ9HCN3 771 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC4BQ9NT99 713 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 HSPBP1Q9NZL4 362 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 RGL1Q9NZL6 768 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PDP2Q9P2J9 529 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANKFY1Q9P2R3 1169 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 PSMC3IPQ9P2W1 217 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZFP69BQ9UJL9 534 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 ANAPC7Q9UJX3 599 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCNL1Q9UK58 526 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 SHOC2Q9UQ13 582 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRCH1Q9Y2L9 728 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 MTO1Q9Y2Z2 717 aaKnown RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 COQ4Q9Y3A0 265 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 TAF1P21675 1872 aa5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 COL16A1Q07092 1604 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 GREB1LQ9C091 1923 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P16-201ENST00000508037 QSER1Q2KHR3 1735 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 NRAPQ86VF7 1730 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZBBXA8MT70 800 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 F5H6K3 240 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SOCS7O14512 581 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DNALI1O14645 258 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP26A1O43174 497 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHMP2AO43633 222 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DKC1O60832 514 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PEX11AO75192 247 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SMIM24O75264 130 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 HAUS5O94927 633 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TJP3O95049 919 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SNUPNO95149 360 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TGDSO95455 350 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ASMTLO95671 621 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 P4HBP07237 508 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TPBGLP0DKB5 382 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PECAM1P16284 738 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CA4P22748 312 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PTPN7P35236 360 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHKAP35790 457 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PAPOLAP51003 745 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCNHP51946 323 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 STAT2P52630 851 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 FKBP1AP62942 108 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 GTF2BQ00403 316 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 OCRLQ01968 901 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ROR2Q01974 943 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TAP1Q03518 808 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PPP3CAQ08209 521 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SNX1Q13596 522 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 MOGSQ13724 837 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 COG2Q14746 738 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 KPNB1Q14974 876 aaKnown RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 KRT72Q14CN4 511 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBCCQ15814 346 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PDCD2Q16342 344 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 GSTA3Q16772 222 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 USH1GQ495M9 461 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC38Q5VT99 294 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 WDR78Q5VTH9 848 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DAB2IPQ5VWQ8 1189 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM91A1Q658Y4 838 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF746Q6NUN9 644 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CDC42EP5Q6NZY7 148 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 TATDN1Q6P1N9 297 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM47EQ6ZV65 393 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 HAUS6Q7Z4H7 955 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM160B2Q86V87 743 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PALB2Q86YC2 1186 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCDC125Q86Z20 511 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CLEC10AQ8IUN9 316 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 MCOLN2Q8IZK6 566 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZDHHC14Q8IZN3 488 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SPICE1Q8N0Z3 855 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 SAMD3Q8N6K7 520 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM13CQ8NE31 585 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 DENND1AQ8TEH3 1009 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 CHURC1Q8WUH1 139 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 C10orf82Q8WW14 230 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAML1Q92585 1016 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 PRCCQ92733 491 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 APBB2Q92870 758 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 MCUR1Q96AQ8 359 aa5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 GJD4Q96KN9 370 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZFP42Q96MM3 310 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms