RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CYP11B1P15538 503 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 GNA15P30679 374 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 KIF11P52732 1056 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 WSCD1Q658N2 575 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 CD300LGQ6UXG3 332 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 NOP9Q86U38 636 aaKnown RBP18.63■□□□□ 0.57
RNF4-209ENST00000507784 METTL23Q86XA0 190 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 ZNF689Q96CS4 500 aaPredicted RBP18.63■□□□□ 0.57
RNF4-209ENST00000507784 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 HEXIM2Q96MH2 286 aaKnown RBP18.63■□□□□ 0.57
RNF4-209ENST00000507784 ELOVL4Q9GZR5 314 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 DNAI2Q9GZS0 605 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 CXXC1Q9P0U4 656 aaPredicted RBP18.63■□□□□ 0.57
RNF4-209ENST00000507784 HMGXB4Q9UGU5 601 aa18.63■□□□□ 0.57
RNF4-209ENST00000507784 NDUFA10O95299 355 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 IPO7O95373 1038 aaKnown RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 GALTP07902 379 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 SSTR3P32745 418 aaPredicted RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 RAD23BP54727 409 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 BCAR1P56945 870 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 GFPT1Q06210 699 aaPredicted RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 SPA17Q15506 151 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 TOGARAM2Q6ZUX3 1019 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 OSTM1Q86WC4 334 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 CMTR2Q8IYT2 770 aaKnown RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 EPS8L1Q8TE68 723 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 WHAMMQ8TF30 809 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 TWNKQ96RR1 684 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 DESI2Q9BSY9 194 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 NT5C1AQ9BXI3 368 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 FAM124BQ9H5Z6 455 aaPredicted RBP18.62■□□□□ 0.57
RNF4-209ENST00000507784 CWH43Q9H720 699 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 ADAMTS1Q9UHI8 967 aa18.62■□□□□ 0.57
RNF4-209ENST00000507784 ARHGEF37A1IGU5 675 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 TMEM189-UBE2V1I3L0A0 370 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 TRAPPC3O43617 180 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 MMEP08473 750 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 PAEPP09466 180 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 FAM163BP0C2L3 166 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 BRD2P25440 801 aaKnown RBP18.61■□□□□ 0.57
RNF4-209ENST00000507784 PBX3P40426 434 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 ALDH7A1P49419 539 aaKnown RBP18.61■□□□□ 0.57
RNF4-209ENST00000507784 ZNF132P52740 706 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 INCA1Q0VD86 236 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 UNC93AQ86WB7 457 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 GLYCTKQ8IVS8 523 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 TMEM86AQ8N2M4 240 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 SLC4A11Q8NBS3 891 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 SUSD3Q96L08 255 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 NOCTQ9UK39 431 aaKnown RBP18.61■□□□□ 0.57
RNF4-209ENST00000507784 ADAM28Q9UKQ2 775 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 PCDHB8Q9UN66 801 aa18.61■□□□□ 0.57
RNF4-209ENST00000507784 FAM170AA1A519 330 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 EIF3CLB5ME19 914 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 HCRTO43612 131 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 VDRP11473 427 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 CHRNB2P17787 502 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 MSNP26038 577 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 AARSP49588 968 aaKnown RBP eCLIP18.6■□□□□ 0.57
RNF4-209ENST00000507784 CDR2Q01850 454 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 CYP27A1Q02318 531 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 CCDC122Q5T0U0 273 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 ZNF677Q86XU0 584 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 LNX1Q8TBB1 728 aaPredicted RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 ZNF606Q8WXB4 792 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 EIF3CQ99613 913 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 DDX43Q9NXZ2 648 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 DSEQ9UL01 958 aa18.6■□□□□ 0.57
RNF4-209ENST00000507784 MRPL42Q9Y6G3 142 aaKnown RBP18.6■□□□□ 0.57
RNF4-209ENST00000507784 A0A087X0T9 212 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 TMCO5BA8MYB1 307 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 M0QZQ0 153 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.572e-8■■■□□ 17.9
RNF4-209ENST00000507784 MED7O43513 233 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 GJB5O95377 273 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 FAM228BP0C875 321 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 ATP2A2P16615 1042 aaKnown RBP18.59■□□□□ 0.57
RNF4-209ENST00000507784 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
RNF4-209ENST00000507784 LMO2P25791 158 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 ANXA13P27216 316 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 MAGEA1P43355 309 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
RNF4-209ENST00000507784 LHX1P48742 406 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 KRT83P78385 493 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 ASTE1Q2TB18 679 aaPredicted RBP18.59■□□□□ 0.57
RNF4-209ENST00000507784 SMYD5Q6GMV2 418 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 LIMS2Q7Z4I7 341 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 KIAA1328Q86T90 577 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 CEP57Q86XR8 500 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 HERC6Q8IVU3 1022 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms