RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 WDR72Q3MJ13 1102 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 CFAP221Q4G0U5 840 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 DCAF17Q5H9S7 520 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 FKBP15Q5T1M5 1219 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 LILRA6Q6PI73 481 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 VSTM1Q6UX27 236 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 TMEM173Q86WV6 379 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 IRF2BP1Q8IU81 584 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 TCEAL8Q8IYN2 117 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ADGRF2Q8IZF7 708 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 C3orf58Q8NDZ4 430 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 GDPD5Q8WTR4 605 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 RIN2Q8WYP3 895 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 NT5C1BQ96P26 610 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 KLHL5Q96PQ7 755 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 PAAF1Q9BRP4 392 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 EDEM3Q9BZQ6 932 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 IKZF4Q9H2S9 585 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 SFXN1Q9H9B4 322 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ALG13Q9NP73 1137 aaKnown RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 PNPLA8Q9NP80 782 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 COMMD8Q9NX08 183 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 MYO6Q9UM54 1294 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 BARX2Q9UMQ3 279 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 ZFP37Q9Y6Q3 630 aaPredicted RBP9.06□□□□□ -0.96
PDGFC-205ENST00000506880 MYH10P35580 1976 aa9.06□□□□□ -0.96
PDGFC-205ENST00000506880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 A0A1W2PQC6 194 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 SYCE3A1L190 88 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 XYLBO75191 536 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 PAEPP09466 180 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CNPP09543 421 aaKnown RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CDK11BP21127 795 aaKnown RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 IBSPP21815 317 aaPredicted RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 KLRC2P26717 231 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 GCLMP48507 274 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CLCN4P51793 760 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 BPIFB4P59827 614 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ERVFC1P60507 584 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ADAM15Q13444 863 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CTXN3Q4LDR2 81 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ISM2Q6H9L7 571 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 FAM171BQ6P995 826 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CRYBG2Q8N1P7 616 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 PDCL2Q8N4E4 241 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 KIAA1958Q8N8K9 716 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ZSWIM2Q8NEG5 633 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 PLEKHO2Q8TD55 490 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 SLC22A17Q8WUG5 538 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ATXN2LQ8WWM7 1075 aaKnown RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ERGIC2Q96RQ1 377 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 ZCWPW1Q9H0M4 648 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 NUCKS1Q9H1E3 243 aaKnown RBP9.05□□□□□ -0.96
PDGFC-205ENST00000506880 DNAJC25Q9H1X3 360 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 SNX25Q9H3E2 840 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 TSPY26PQ9H489 355 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 GOLGA2P5Q9HBQ8 144 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 FBXW11Q9UKB1 542 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 CNTN6Q9UQ52 1028 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 SNX9Q9Y5X1 595 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
PDGFC-205ENST00000506880 EPOPA6NHQ4 379 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 LGALS16A8MUM7 142 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 TEX28O15482 410 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 CLASP2O75122 1294 aaKnown RBP9.04□□□□□ -0.96
PDGFC-205ENST00000506880 VNN1O95497 513 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 CST3P01034 146 aaPredicted RBP9.04□□□□□ -0.96
PDGFC-205ENST00000506880 CCDC172P0C7W6 258 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 DNAJB1P25685 340 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 TKTP29401 623 aaKnown RBP9.04□□□□□ -0.96
PDGFC-205ENST00000506880 ELF1P32519 619 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 GNL1P36915 607 aaPredicted RBP9.04□□□□□ -0.96
PDGFC-205ENST00000506880 MTHFRP42898 656 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 PPP3CCP48454 512 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 MFAP3P55082 362 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 WNT7BP56706 349 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 STX17P56962 302 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 MYL6P60660 151 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 DLG4P78352 724 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 ADGRE1Q14246 886 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 NCAPHQ15003 741 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 IQCB1Q15051 598 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 SOWAHAQ2M3V2 549 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 FIGNQ5HY92 759 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
PDGFC-205ENST00000506880 RTP2Q5QGT7 225 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 LIN9Q5TKA1 542 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 PLPP4Q5VZY2 271 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 CES5AQ6NT32 575 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 PPP1R2P3Q6NXS1 205 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
PDGFC-205ENST00000506880 ELMOD1Q8N336 334 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms