RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PIM1P11309 404 aaPredicted RBP7.21□□□□□ -1.26
HERC4-213ENST00000506515 SLC11A2P49281 568 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 NFIXQ14938 502 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 AMOTQ4VCS5 1084 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 KLHDC7AQ5VTJ3 777 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 AGAP9Q5VTM2 703 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 NAIF1Q69YI7 327 aaPredicted RBP7.21□□□□□ -1.26
HERC4-213ENST00000506515 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 SLC30A10Q6XR72 485 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 RHOT2Q8IXI1 618 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 TRIM43Q96BQ3 446 aaPredicted RBP7.21□□□□□ -1.26
HERC4-213ENST00000506515 MSLNLQ96KJ4 702 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 ZNF518BQ9C0D4 1074 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 PLCB1Q9NQ66 1216 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 STARD7Q9NQZ5 370 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 SORCS3Q9UPU3 1222 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 ATP11BQ9Y2G3 1177 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 TMX2Q9Y320 296 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 RIPOR2Q9Y4F9 1068 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 XDHP47989 1333 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 CHD1O14646 1710 aa7.21□□□□□ -1.26
HERC4-213ENST00000506515 POLRMTO00411 1230 aaKnown RBP7.2□□□□□ -1.26
HERC4-213ENST00000506515 SETSIPP0DME0 302 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 TSHRP16473 764 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 POU6F2P78424 691 aaPredicted RBP7.2□□□□□ -1.26
HERC4-213ENST00000506515 PLP2Q04941 152 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 RRP1BQ14684 758 aaKnown RBP7.2□□□□□ -1.26
HERC4-213ENST00000506515 HTR3DQ70Z44 454 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 MICU3Q86XE3 530 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CFAP52Q8N1V2 620 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CHST13Q8NET6 341 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 OR56A1Q8NGH5 318 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 PNKPQ96T60 521 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 SMOQ99835 787 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 ZSWIM1Q9BR11 485 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CNPPD1Q9BV87 410 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CHMP4AQ9BY43 222 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CERS4Q9HA82 394 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 CD248Q9HCU0 757 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 XPR1Q9UBH6 696 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 JAG2Q9Y219 1238 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 TCAF1Q9Y4C2 921 aa7.2□□□□□ -1.26
HERC4-213ENST00000506515 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
HERC4-213ENST00000506515 CCDC88BA6NC98 1476 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 GRIN2BQ13224 1484 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 SCAF4O95104 1147 aaKnown RBP7.19□□□□□ -1.26
HERC4-213ENST00000506515 ZNF844Q08AG5 666 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 FAM160B1Q5W0V3 765 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.19□□□□□ -1.26
HERC4-213ENST00000506515 DEPTORQ8TB45 409 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 EDAQ92838 391 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 KIAA1191Q96A73 305 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 TRIB1Q96RU8 372 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 BRIP1Q9BX63 1249 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 STK31Q9BXU1 1019 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 TEX101Q9BY14 249 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 GOLGA2P5Q9HBQ8 144 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 TRPM5Q9NZQ8 1165 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 HSFX1Q9UBD0 423 aa7.19□□□□□ -1.26
HERC4-213ENST00000506515 SYNJ2O15056 1496 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 GAPVD1Q14C86 1478 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 A0A087WWL8 130 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 A0A1B0GTW7 788 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 CCDC78A2IDD5 438 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 PYCARD-AS1I3L0S3 204 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 APOL1O14791 398 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 RPS6KA4O75676 772 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 CHRM3P20309 590 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 ABCB4P21439 1286 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 HSD11B2P80365 405 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 PIGFQ07326 219 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 CHAF1AQ13111 956 aaPredicted RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 PDCD4Q53EL6 469 aaKnown RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 DCAF12L1Q5VU92 463 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 IZUMO3Q5VZ72 239 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 HIBCHQ6NVY1 386 aaPredicted RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 TAPT1Q6NXT6 567 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 EXOC8Q8IYI6 725 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 RNF152Q8N8N0 203 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 OR56A3Q8NH54 315 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 SNX22Q96L94 193 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 DCLRE1CQ96SD1 692 aaKnown RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 TTYH3Q9C0H2 523 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 VPS11Q9H270 941 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 RNPEPQ9H4A4 650 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 A1CFQ9NQ94 594 aaKnown RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 GPRC5BQ9NZH0 403 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 VSX1Q9NZR4 365 aaPredicted RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 ITGB1BP2Q9UKP3 347 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 PADI4Q9UM07 663 aa7.18□□□□□ -1.26
HERC4-213ENST00000506515 TARBP1Q13395 1621 aaKnown RBP7.18□□□□□ -1.26
HERC4-213ENST00000506515 ABHD14A-ACY1A0A1B0GW23 586 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 DIRC3C9JPN6 131 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 K7ESM1 405 aa7.17□□□□□ -1.26
HERC4-213ENST00000506515 ERN1O75460 977 aaKnown RBP7.17□□□□□ -1.26
HERC4-213ENST00000506515 RASSF9O75901 435 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms