RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 GKN1Q9NS71 199 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 RXFP3Q9NSD7 469 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 DDX19AQ9NUU7 478 aaKnown RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 KCND2Q9NZV8 630 aa10.76□□□□□ -0.69
NEDD9-210ENST00000505589 LARSQ9P2J5 1176 aaKnown RBP10.76□□□□□ -0.69
NEDD9-210ENST00000505589 NRG2O14511 850 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 KHNYNO15037 678 aaKnown RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 HIP1RO75146 1068 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 CSRP1P21291 193 aaKnown RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 AARSP49588 968 aaKnown RBP eCLIP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 NOVA1P51513 510 aaKnown RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 CREB5Q02930 508 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 MCL1Q07820 350 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 PDGFRLQ15198 375 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 ZNF174Q15697 407 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 ZBTB6Q15916 424 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 PLK5Q496M5 336 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 PSAPL1Q6NUJ1 521 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 GAREM2Q75VX8 874 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 CMTM8Q8IZV2 173 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 TTC8Q8TAM2 541 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 SPPL2BQ8TCT7 592 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 FAM83CQ9BQN1 747 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 RPF1Q9H9Y2 349 aaKnown RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 UXTQ9UBK9 157 aaPredicted RBP10.75□□□□□ -0.69
NEDD9-210ENST00000505589 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 COL4A3Q01955 1670 aa10.75□□□□□ -0.69
NEDD9-210ENST00000505589 TICRRQ7Z2Z1 1910 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 CFAP47Q6ZTR5 3102 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 MTMR11A4FU01 709 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 EXTL3O43909 919 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 APBB3O95704 486 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 HARSP12081 509 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 LILRA4P59901 499 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 LMAN2Q12907 356 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 BYSLQ13895 437 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 ACAP1Q15027 740 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 RINT1Q6NUQ1 792 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 SKAP1Q86WV1 359 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 CPA6Q8N4T0 437 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 FSIP1Q8NA03 581 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 ATAD1Q8NBU5 361 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 SNX29Q8TEQ0 813 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 MRPS31Q92665 395 aaKnown RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 BICD1Q96G01 975 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 ZFYVE19Q96K21 471 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 C8orf76Q96K31 380 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 P2RY13Q9BPV8 354 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 EDEM2Q9BV94 578 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 DUSP15Q9H1R2 295 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 TMEM9BQ9NQ34 198 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 TDP1Q9NUW8 608 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 ANKFY1Q9P2R3 1169 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 TIMM13Q9Y5L4 95 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-210ENST00000505589 GREB1Q4ZG55 1949 aa10.74□□□□□ -0.69
NEDD9-210ENST00000505589 TTC26A0AVF1 554 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 C4orf47A7E2U8 309 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 H0Y626 953 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 RNF40O75150 1001 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 ALDH1A2O94788 518 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 TRIM16O95361 564 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 CYP11A1P05108 521 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 CSH1P0DML2 217 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 CSH2P0DML3 217 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 PLS3P13797 630 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 GBP1P32455 592 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 PDE6CP51160 858 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 GALK1P51570 392 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 POU5F1Q01860 360 aaKnown RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 TNK2Q07912 1038 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 ZNF268Q14587 947 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 ME3Q16798 604 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 TTC38Q5R3I4 469 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 LMBRD2Q68DH5 695 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 DTHD1Q6ZMT9 781 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 C1orf186Q6ZWK4 172 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 IGSF22Q8N9C0 903 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 KCNN1Q92952 543 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 RSPRY1Q96DX4 576 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 SENP8Q96LD8 212 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 LLPHQ9BRT6 129 aaKnown RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 NUSAP1Q9BXS6 441 aaKnown RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 SLC46A2Q9BY10 475 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 POLD4Q9HCU8 107 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 DERAQ9Y315 318 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 TRIP11Q15643 1979 aa10.73□□□□□ -0.69
NEDD9-210ENST00000505589 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
NEDD9-210ENST00000505589 ABLIM1O14639 778 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms