RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CUL2Q13617 745 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 CYP26C1Q6V0L0 522 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 MSLNLQ96KJ4 702 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 SENP8Q96LD8 212 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZSWIM1Q9BR11 485 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 CASTOR2A6NHX0 329 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 ODC1P11926 461 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 RAD23BP54727 409 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 FANCCQ00597 558 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 USP41Q3LFD5 358 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 KLHL5Q96PQ7 755 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 TLR9Q9NR96 1032 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 AIPL1Q9NZN9 384 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 PCDHGC3Q9UN70 934 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 PRUNE2Q8WUY3 3088 aa8.89□□□□□ -0.99
CDC42SE2-208ENST00000505065 CLASP2O75122 1294 aaKnown RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 MICAL2O94851 1124 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 CDK17Q00537 523 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SMC1AQ14683 1233 aaKnown RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 CFAP221Q4G0U5 840 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 RAB41Q5JT25 222 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 TPGS2Q68CL5 300 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SLC4A11Q8NBS3 891 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 FBXO22Q8NEZ5 403 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 PNPLA8Q9NP80 782 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 COMMD8Q9NX08 183 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 AGAP1Q9UPQ3 857 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 TEX33O43247 280 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM191BP0C7N4 346 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 LHX1P48742 406 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 ANKS3Q6ZW76 656 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 VSTM4Q8IW00 320 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SPATA17Q96L03 361 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 MRPL45Q9BRJ2 306 aaKnown RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 S1PR5Q9H228 398 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 CRTAC1Q9NQ79 661 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 NOCTQ9UK39 431 aaKnown RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 RNF225M0QZC1 329 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 GLP2RO95838 553 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 GLUD2P49448 558 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 GPR17Q13304 367 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SNX30Q5VWJ9 437 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 GBP6Q6ZN66 633 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 EFHBQ8N7U6 833 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 TATDN2Q93075 761 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 FUBP3Q96I24 572 aaKnown RBP eCLIP8.88□□□□□ -0.998e-7■□□□□ 9.2
CDC42SE2-208ENST00000505065 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 DNAJC7Q99615 494 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SMYD3Q9H7B4 428 aa8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 BARX2Q9UMQ3 279 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE2-208ENST00000505065 SOBPA7XYQ1 873 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 LMBRD2Q68DH5 695 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 IQCEQ6IPM2 695 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 BHLHA9Q7RTU4 235 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TCEAL8Q8IYN2 117 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ABI1Q8IZP0 508 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 STK33Q9BYT3 514 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 MTMR10Q9NXD2 777 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 POLIQ9UNA4 740 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZBBXA8MT70 800 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 SLC9A1P19634 815 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 BRCC3P46736 316 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ALDH7A1P49419 539 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 NDUFV1P49821 464 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 MYO1EQ12965 1108 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ASTE1Q2TB18 679 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 SLC30A5Q8TAD4 765 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 PDLIM2Q96JY6 352 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TWNKQ96RR1 684 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TTLL2Q9BWV7 592 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 APOL6Q9BWW8 343 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 CYLDQ9NQC7 956 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 CAPN11Q9UMQ6 739 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 PDE4DIPQ5VU43 2346 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 DOCK8Q8NF50 2099 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 F8VZ95 297 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TNFRSF10BO14763 440 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TRAPPC3O43617 180 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TFAMQ00059 246 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ADAM15Q13444 863 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 GRIN2CQ14957 1233 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 HGSNATQ68CP4 663 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 BNIPLQ7Z465 357 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 IRF2BP2Q7Z5L9 587 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 APPL2Q8NEU8 664 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 POF1BQ8WVV4 589 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 GCNT4Q9P109 453 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 EYSQ5T1H1 3165 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 MYH10P35580 1976 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms