RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 HAND2P61296 217 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 ARHGAP8P85298 464 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 MAMLD1Q13495 774 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 PUM1Q14671 1186 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDH9-202ENST00000505020 MORF4L2Q15014 288 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 SEC23AQ15436 765 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 TRADDQ15628 312 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 DOK7Q18PE1 504 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 KCNT1Q5JUK3 1230 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 CREB3L3Q68CJ9 461 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 SLC25A24Q6NUK1 477 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 CAVIN1Q6NZI2 390 aaKnown RBP7.65□□□□□ -1.18
CDH9-202ENST00000505020 CLEC2AQ6UVW9 174 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 LRSAM1Q6UWE0 723 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 TAOK1Q7L7X3 1001 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 RABEPKQ7Z6M1 372 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 CAND1Q86VP6 1230 aaKnown RBP7.65□□□□□ -1.18
CDH9-202ENST00000505020 P3H2Q8IVL5 708 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 MAML2Q8IZL2 1156 aaPredicted RBP7.65□□□□□ -1.18
CDH9-202ENST00000505020 C17orf53Q8N3J3 647 aaPredicted RBP7.65□□□□□ -1.18
CDH9-202ENST00000505020 HDDC3Q8N4P3 179 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 BVESQ8NE79 360 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 TRIM58Q8NG06 486 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 STYXQ8WUJ0 223 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 ATP6V1G3Q96LB4 118 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 GAL3ST1Q99999 423 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 DDX50Q9BQ39 737 aaKnown RBP7.65□□□□□ -1.18
CDH9-202ENST00000505020 BCL7BQ9BQE9 202 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 PACSIN1Q9BY11 444 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 ANKRD2Q9GZV1 360 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDH9-202ENST00000505020 FANCEQ9HB96 536 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 DNAJC28Q9NX36 388 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 WBP1LQ9NX94 342 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 ETAA1Q9NY74 926 aa7.65□□□□□ -1.18
CDH9-202ENST00000505020 PTPDC1A2A3K4 754 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 A4D1N5 150 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 GNAT3A8MTJ3 354 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 H3BNC9 293 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 VILLO15195 856 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 FAM155BO75949 473 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ESRRAP11474 423 aaPredicted RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 OSMP13725 252 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 SELPP16109 830 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ZNF3P17036 446 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 CYP11B2P19099 503 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ABCD3P28288 659 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 EEF1DP29692 281 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 ADSSP30520 456 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 PRKAR1BP31321 381 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 AMPHP49418 695 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 AP3M2P53677 418 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 MRPS5P82675 430 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 TFAP4Q01664 338 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TYRO3Q06418 890 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 RIPK1Q13546 671 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 PDCD1Q15116 288 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 RCN1Q15293 331 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 BBS9Q3SYG4 887 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 CYP4A22Q5TCH4 519 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 DENND5AQ6IQ26 1287 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TMEM214Q6NUQ4 689 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 ZCCHC12Q6PEW1 402 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ARHGAP27Q6ZUM4 889 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 PXKQ7Z7A4 578 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TMEM200AQ86VY9 491 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 METTL23Q86XA0 190 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 CCDC83Q8IWF9 413 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ZBTB8BQ8NAP8 495 aaPredicted RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 ATP11CQ8NB49 1132 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TBC1D22AQ8WUA7 517 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 AFG1LQ8WV93 481 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TBC1D5Q92609 795 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 HS6ST2Q96MM7 605 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 CMTM3Q96MX0 182 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 TTC25Q96NG3 672 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 CATSPER2Q96P56 530 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 HS3ST6Q96QI5 342 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ZSCAN10Q96SZ4 725 aaPredicted RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 RIOK1Q9BRS2 568 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 NSRP1Q9H0G5 558 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 C14orf93Q9H972 538 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 GPR108Q9NPR9 543 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 OXSMQ9NWU1 459 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 WHRNQ9P202 907 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 MORF4L1Q9UBU8 362 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 KLHL20Q9Y2M5 609 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 RNF103-CHMP3A0A140T963 221 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 RNF103O00237 685 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 POP4O95707 220 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 TUBB4AP04350 444 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 DLATP10515 647 aaKnown RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 XRCC6P12956 609 aaKnown RBP eCLIP7.64□□□□□ -1.19
CDH9-202ENST00000505020 TBXAS1P24557 533 aaPredicted RBP7.64□□□□□ -1.19
CDH9-202ENST00000505020 ARL3P36405 182 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 ABCG1P45844 678 aa7.64□□□□□ -1.19
CDH9-202ENST00000505020 NT5C2P49902 561 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms