RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ACKR2O00590 384 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 MEFVO15553 781 aaPredicted RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 B4GALT5O43286 388 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 CDC45O75419 566 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 RECQL4O94761 1208 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 OAZ2O95190 189 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 TDP2O95551 362 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 APBB3O95704 486 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SPINK2P20155 84 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 FECHP22830 423 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 RPS6KB1P23443 525 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 PDIA3P30101 505 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 HSPA4P34932 840 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 CLCNKBP51801 687 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 AKAP17AQ02040 695 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 CREB5Q02930 508 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 KRT32Q14532 448 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 PON2Q15165 354 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 TEAD2Q15562 447 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 NPY5RQ15761 445 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 CCDC6Q16204 474 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 DCAF4L1Q3SXM0 396 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 XKR9Q5GH70 373 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SLC23A3Q6PIS1 610 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 RASSF3Q86WH2 238 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 BPIFB1Q8TDL5 484 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 ASAP3Q8TDY4 903 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 HASPINQ8TF76 798 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 RABGGTAQ92696 567 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 HAS1Q92839 578 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SUSD3Q96L08 255 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 AIFM3Q96NN9 605 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 NAP1L4Q99733 375 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 ADPGKQ9BRR6 497 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SLC26A6Q9BXS9 759 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 C2orf40Q9H1Z8 148 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 ATP13A2Q9NQ11 1180 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SLC38A7Q9NVC3 462 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 THG1LQ9NWX6 298 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 SNTG2Q9NY99 539 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 GTSE1Q9NYZ3 720 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 DDX25Q9UHL0 483 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 FBXL5Q9UKA1 691 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 TBX20Q9UMR3 447 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 PCDHA4Q9UN74 947 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 PDCD11Q14690 1871 aaKnown RBP6.6□□□□□ -1.35
GYPB-204ENST00000504951 NUP205Q92621 2012 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 CACNA1EQ15878 2313 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 SMIM28A0A1B0GU29 152 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 KCNE1P15382 129 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 PAX3P23760 479 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 IGFBP6P24592 240 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 SOX9P48436 509 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 MCM2P49736 904 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 RARRES1P49788 294 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 MMP16P51512 607 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 IRX4P78413 519 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 TWF1Q12792 350 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 SLC14A1Q13336 389 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 TOB2Q14106 344 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 USP39Q53GS9 565 aaKnown RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 TCEAL6Q6IPX3 200 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 FSTL4Q6MZW2 842 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 BLOC1S2Q6QNY1 142 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 CCNI2Q6ZMN8 369 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 APBB1IPQ7Z5R6 666 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 SLFN12Q8IYM2 578 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 C3orf58Q8NDZ4 430 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 MCPH1Q8NEM0 835 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 APPL2Q8NEU8 664 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 ADAMTS14Q8WXS8 1223 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 TCEAL3Q969E4 200 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 PSMG2Q969U7 264 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 ACDQ96AP0 544 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 CHFRQ96EP1 664 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 SMOC1Q9H4F8 434 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 PDZD7Q9H5P4 517 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 TASP1Q9H6P5 420 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 RGL1Q9NZL6 768 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 KIAA1522Q9P206 1035 aaPredicted RBP6.59□□□□□ -1.35
GYPB-204ENST00000504951 CACNG4Q9UBN1 327 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 KLK13Q9UKR3 277 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 ABCA7Q8IZY2 2146 aa6.59□□□□□ -1.35
GYPB-204ENST00000504951 LOC400499M0QZD8 3231 aa6.59□□□□□ -1.36
GYPB-204ENST00000504951 NAV2Q8IVL1 2488 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 M0QZQ0 153 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
GYPB-204ENST00000504951 SLC37A4O43826 429 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 DDX6P26196 483 aaKnown RBP eCLIP6.58□□□□□ -1.36
GYPB-204ENST00000504951 HOXC13P31276 330 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 BRCC3P46736 316 aa6.58□□□□□ -1.36
GYPB-204ENST00000504951 EPHB3P54753 998 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms