RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZBTB45Q96K62 511 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 TMEM209Q96SK2 561 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 LSM14BQ9BX40 385 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 PTPRHQ9HD43 1115 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 VPS45Q9NRW7 570 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 DDX19AQ9NUU7 478 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 THG1LQ9NWX6 298 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 PCDHGA5Q9Y5G8 931 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 KIF26AQ9ULI4 1882 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 CITO14578 2027 aa7.51□□□□□ -1.21
NPIPB3-203ENST00000504841 OR6C75A6NL08 312 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 C4orf47A7E2U8 309 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SFI1A8K8P3 1242 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 ABLIM1O14639 778 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SLC16A4O15374 487 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 HIP1RO75146 1068 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 RNF40O75150 1001 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 TOP3BO95985 862 aaKnown RBP7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 EGFP01133 1207 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 RAP1GAPP47736 663 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 PLCB2Q00722 1185 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 RAD51AP2Q09MP3 1159 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 BFSP1Q12934 665 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 STRN3Q13033 797 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 PSMD2Q13200 908 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 NBR1Q14596 966 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 NOLC1Q14978 699 aaKnown RBP eCLIP7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 TAF12Q16514 161 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SLC10A6Q3KNW5 377 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 MGAT5BQ3V5L5 792 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 PLK5Q496M5 336 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 TRIM68Q6AZZ1 485 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 CENPPQ6IPU0 288 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 ARMCX5Q6P1M9 558 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SYNPOQ8N3V7 929 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 BEST2Q8NFU1 509 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SNX29Q8TEQ0 813 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 GIPC2Q8TF65 315 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 PSMG2Q969U7 264 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 RUSC1Q9BVN2 902 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 ADAM33Q9BZ11 813 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 EBF3Q9H4W6 596 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 GKN1Q9NS71 199 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 MAFFQ9ULX9 164 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 INVSQ9Y283 1065 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 SPAG17Q6Q759 2223 aa7.5□□□□□ -1.21
NPIPB3-203ENST00000504841 NUP210Q8TEM1 1887 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ATG2BQ96BY7 2078 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 E9PMD0 336 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 M0QZQ0 153 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 PPEF2O14830 753 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ATG13O75143 517 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 OAZ2O95190 189 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 FGF19O95750 216 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 CAVIN2O95810 425 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ARSAP15289 507 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 PROZP22891 400 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 CDC25CP30307 473 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 NMT1P30419 496 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 GPR17Q13304 367 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ACAP1Q15027 740 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 PTPAQ15257 358 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ANKRD1Q15327 319 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ZRSR1Q15695 479 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ME3Q16798 604 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 UAP1L1Q3KQV9 507 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 TMEM196Q5HYL7 178 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 TTC38Q5R3I4 469 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 DAB2IPQ5VWQ8 1189 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 NAIF1Q69YI7 327 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ITIH5Q86UX2 942 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 DAW1Q8N136 415 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 NSUN7Q8NE18 718 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 STKLD1Q8NE28 680 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 OR10T2Q8NGX3 314 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 RPLP0P6Q8NHW5 317 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 BICD1Q96G01 975 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 DRC1Q96MC2 740 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 DUSP15Q9H1R2 295 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 TASP1Q9H6P5 420 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 TMEM134Q9H6X4 195 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 HPS4Q9NQG7 708 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 OBP2AQ9NY56 170 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ARHGAP28Q9P2N2 729 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 CCL26Q9Y258 94 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 ASB3Q9Y575 518 aa7.49□□□□□ -1.21
NPIPB3-203ENST00000504841 CCDC163A0A0D9SF12 145 aa7.48□□□□□ -1.21
NPIPB3-203ENST00000504841 LNP1A1A4G5 178 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms