RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DSEQ9UL01 958 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 MAPK8IP1Q9UQF2 711 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 SNX9Q9Y5X1 595 aa15.35■□□□□ 0.05
HOXC9-202ENST00000504557 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 HUS1O60921 280 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 PAPLNO95428 1278 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 CYP11A1P05108 521 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 RFX1P22670 979 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 ALDH1A3P47895 512 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 VCPP55072 806 aaKnown RBP15.34■□□□□ 0.05
HOXC9-202ENST00000504557 RBP5P82980 135 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 GPR17Q13304 367 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 HTR4Q13639 388 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 MYBPC2Q14324 1141 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 SURF1Q15526 300 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 DUOXA2Q1HG44 320 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 MGAT5BQ3V5L5 792 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 CYP4A22Q5TCH4 519 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 NPAS3Q8IXF0 933 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 SLC44A3Q8N4M1 653 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 FBXL6Q8N531 539 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 FLCNQ8NFG4 579 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 FGF14Q92915 247 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 BORCS6Q96GS4 357 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 RTP3Q9BQQ7 232 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 OXCT2Q9BYC2 517 aaPredicted RBP15.34■□□□□ 0.05
HOXC9-202ENST00000504557 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
HOXC9-202ENST00000504557 CA14Q9ULX7 337 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 DUSP12Q9UNI6 340 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 MYH10P35580 1976 aa15.34■□□□□ 0.05
HOXC9-202ENST00000504557 NRG2O14511 850 aaPredicted RBP15.33■□□□□ 0.04
HOXC9-202ENST00000504557 HCRTO43612 131 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 PAX3P23760 479 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 CCR2P41597 374 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 CASP4P49662 377 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 EPHB3P54753 998 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 PSMD2Q13200 908 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 CENPPQ6IPU0 288 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 RTL10Q7L3V2 364 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 SIX5Q8N196 739 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 PDCL2Q8N4E4 241 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 HPDLQ96IR7 371 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 SLITRK6Q9H5Y7 841 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 ASAH2Q9NR71 780 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
HOXC9-202ENST00000504557 PHACTR2O75167 634 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 POU2F2P09086 479 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 TSPY1Q01534 308 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 DPYDQ12882 1025 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 IER5LQ5T953 404 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 CEP135Q66GS9 1140 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 LRRTM3Q86VH5 581 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 WDR49Q8IV35 697 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 GPR152Q8TDT2 470 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 GIPC2Q8TF65 315 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 MMS19Q96T76 1030 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 CGRRF1Q99675 332 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 LPIN3Q9BQK8 851 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 ZCWPW1Q9H0M4 648 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 DDX43Q9NXZ2 648 aaKnown RBP15.32■□□□□ 0.04
HOXC9-202ENST00000504557 ZFP37Q9Y6Q3 630 aaPredicted RBP15.32■□□□□ 0.04
HOXC9-202ENST00000504557 DENND4CQ5VZ89 1909 aa15.32■□□□□ 0.04
HOXC9-202ENST00000504557 OBSL1O75147 1896 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 MIA3Q5JRA6 1907 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 FAM237AA0A1B0GTK4 181 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 ANHXE9PGG2 379 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 ZNF197O14709 1029 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 MYL1P05976 194 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
HOXC9-202ENST00000504557 PLD1Q13393 1074 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 BIRC3Q13489 604 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 PNOCQ13519 176 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 PSMD6Q15008 389 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 TEAD2Q15562 447 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 TAF12Q16514 161 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 CCDC142Q17RM4 750 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 PRSS36Q5K4E3 855 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 MTSS1LQ765P7 747 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 TRAPPC11Q7Z392 1133 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 BMP8AQ7Z5Y6 402 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 OSTM1Q86WC4 334 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 SMYD4Q8IYR2 804 aaPredicted RBP15.31■□□□□ 0.04
HOXC9-202ENST00000504557 DCP1BQ8IZD4 617 aaKnown RBP15.31■□□□□ 0.04
HOXC9-202ENST00000504557 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 CXorf38Q8TB03 319 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 GOLGA5Q8TBA6 731 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
HOXC9-202ENST00000504557 ELMO3Q96BJ8 720 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 PI4K2AQ9BTU6 479 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 DNAJC25Q9H1X3 360 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 TMLHEQ9NVH6 421 aa15.31■□□□□ 0.04
HOXC9-202ENST00000504557 MAFFQ9ULX9 164 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms