RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
TNPO1-202ENST00000503084 GDAQ9Y2T3 454 aa12.54□□□□□ -0.4
TNPO1-202ENST00000503084 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
TNPO1-202ENST00000503084 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
TNPO1-202ENST00000503084 TDP2O95551 362 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 GLRA2P23416 452 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 EIF2S3P41091 472 aaKnown RBP12.53□□□□□ -0.4
TNPO1-202ENST00000503084 EPHB3P54753 998 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 SEC13P55735 322 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 POU5F1BQ06416 359 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 NBR1Q14596 966 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 RTN1Q16799 776 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 MAP7D1Q3KQU3 841 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 CCDC33Q8N5R6 958 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
TNPO1-202ENST00000503084 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 ETNPPLQ8TBG4 499 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 CD101Q93033 1021 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
TNPO1-202ENST00000503084 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 KNTC1P50748 2209 aa12.53□□□□□ -0.4
TNPO1-202ENST00000503084 PODXLO00592 558 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 ZBTB39O15060 712 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 DKK1O94907 266 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 SYPP08247 313 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 ATXN1LP0C7T5 689 aaKnown RBP12.52□□□□□ -0.41
TNPO1-202ENST00000503084 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.41
TNPO1-202ENST00000503084 CRY1Q16526 586 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 PFKFB3Q16875 520 aaPredicted RBP12.52□□□□□ -0.41
TNPO1-202ENST00000503084 TAF1BQ53T94 588 aaPredicted RBP12.52□□□□□ -0.41
TNPO1-202ENST00000503084 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 DEFB119Q8N690 84 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 LXNQ9BS40 222 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
TNPO1-202ENST00000503084 CEP192Q8TEP8 1941 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 B8ZZF3 427 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 ERVH48-1M5A8F1 160 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 N4BP3O15049 544 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 SLC28A2O43868 658 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 SOAT2O75908 522 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 ALDH1A2O94788 518 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 ARL2P36404 184 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
TNPO1-202ENST00000503084 DUSP4Q13115 394 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 Q4G0T1 1027 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
TNPO1-202ENST00000503084 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 TTC9BQ8N6N2 239 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
TNPO1-202ENST00000503084 PSMG2Q969U7 264 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 ARID3AQ99856 593 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 SLC46A2Q9BY10 475 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
TNPO1-202ENST00000503084 VAV3Q9UKW4 847 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
TNPO1-202ENST00000503084 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 AP5Z1O43299 807 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 MARCH6O60337 910 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNPO1-202ENST00000503084 FGF19O95750 216 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 HLA-EP13747 358 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 ALDH1A3P47895 512 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 USP11P51784 963 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 CYP4A11Q02928 519 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 GRIK2Q13002 908 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 PDGFRLQ15198 375 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 COLEC12Q5KU26 742 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 CMTM8Q8IZV2 173 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 BAHD1Q8TBE0 780 aaPredicted RBP12.5□□□□□ -0.41
TNPO1-202ENST00000503084 SETD7Q8WTS6 366 aaKnown RBP12.5□□□□□ -0.41
TNPO1-202ENST00000503084 HMGB4Q8WW32 186 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 SUSD3Q96L08 255 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 PRIMPOLQ96LW4 560 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
TNPO1-202ENST00000503084 ECT2Q9H8V3 914 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 IL21Q9HBE4 155 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
TNPO1-202ENST00000503084 LRRIQ4A6NIV6 560 aa12.49□□□□□ -0.41
TNPO1-202ENST00000503084 PLK4O00444 970 aa12.49□□□□□ -0.41
TNPO1-202ENST00000503084 EDN1P05305 212 aa12.49□□□□□ -0.41
TNPO1-202ENST00000503084 P4HBP07237 508 aaKnown RBP12.49□□□□□ -0.41
TNPO1-202ENST00000503084 GNA11P29992 359 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms